bayprior: Bayesian Prior Elicitation and Diagnostics for Clinical Trials
A toolkit for constructing, validating, and justifying Bayesian priors in clinical trial settings. Implements expert elicitation via quantile matching, the roulette method, and moment matching across six distribution families, linear and logarithmic expert pooling, prior-data conflict diagnostics including the Box p-value, surprise index, information divergence, and Mahalanobis distance, sensitivity analyses with tornado and influence heatmap plots, sceptical, robust, and power priors, and automated prior justification reports. Includes a fully modular 'Shiny' application for interactive use. Methods based on O'Hagan et al. (2006, ISBN:9780470029886), Box (1980) <doi:10.2307/2982063>, Oakley and O'Hagan (2010) <https://tonyohagan.co.uk/shelf/>, Schmidli et al. (2014) <doi:10.1111/biom.12242>, Ibrahim and Chen (2000) <doi:10.1214/ss/1009212673>, Spiegelhalter et al. (1994) <doi:10.2307/2983527>.
| Version: | 0.2.12 |
| Depends: | R (≥ 4.1.0) |
| Imports: | cli (≥ 3.6.0), config (≥ 0.3.1), dplyr (≥ 1.1.0), DT (≥ 0.27), ggplot2 (≥ 3.4.0), glue (≥ 1.6.2), golem (≥ 0.4.1), plotly (≥ 4.10.1), purrr (≥ 1.0.0), rlang (≥ 1.2.0), shiny (≥ 1.7.4), shinycssloaders (≥ 1.0.0), shinydashboard (≥ 0.7.2), shinyjs (≥ 2.1.0), shinyWidgets (≥ 0.7.6), stats |
| Suggests: | htmlwidgets (≥ 1.5.4), knitr (≥ 1.40), patchwork (≥ 1.1.0), quarto (≥ 1.4), rmarkdown (≥ 2.20), shinytest2 (≥ 0.3.1), spelling (≥ 2.2.0), testthat (≥ 3.0.0), vdiffr (≥ 1.0.0), withr (≥ 2.5.0) |
| Published: | 2026-06-03 |
| DOI: | 10.32614/CRAN.package.bayprior (may not be active yet) |
| Author: | Ndoh Penn  [aut,
cre] |
| Maintainer: | Ndoh Penn <ndohpenn9 at gmail.com> |
| BugReports: | https://github.com/ndohpenngit/bayprior/issues |
| License: | GPL-3 |
| URL: | https://github.com/ndohpenngit/bayprior |
| NeedsCompilation: | no |
| SystemRequirements: | Quarto CLI (>= 1.5, https://quarto.org) |
| Language: | en-GB |
| Citation: | bayprior citation info |
| Materials: | README, NEWS |
| CRAN checks: | bayprior results |
Documentation:
| Reference manual: | bayprior.html , bayprior.pdf |
| Vignettes: |
Introduction to bayprior (source, R code) Prior-Data Conflict Diagnostics (source, R code) Prior Elicitation Methods (source, R code) Regulatory Reporting (source, R code) Robust, Sceptical, and Power Priors (source, R code) Sensitivity Analysis (source, R code) |
Downloads:
| Package source: | bayprior_0.2.12.tar.gz |
| Windows binaries: | r-devel: not available, r-release: not available, r-oldrel: not available |
| macOS binaries: | r-release (arm64): bayprior_0.2.12.tgz, r-oldrel (arm64): bayprior_0.2.12.tgz, r-release (x86_64): bayprior_0.2.12.tgz, r-oldrel (x86_64): bayprior_0.2.12.tgz |
Linking:
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