CRAN Package Check Results for Package vcfR

Last updated on 2026-08-03 09:51:01 CEST.

Flavor Version Tinstall Tcheck Ttotal Status Flags
r-devel-linux-x86_64-debian-clang 1.16.0 100.40 195.96 296.36 NOTE
r-devel-linux-x86_64-debian-gcc 1.16.0 79.92 153.41 233.33 NOTE
r-devel-linux-x86_64-fedora-clang 1.16.0 169.00 311.72 480.72 OK
r-devel-linux-x86_64-fedora-gcc 1.16.0 88.00 136.40 224.40 NOTE
r-devel-windows-x86_64 1.16.0 113.00 247.00 360.00 NOTE
r-patched-linux-x86_64 1.16.0 107.42 188.30 295.72 OK
r-release-linux-x86_64 1.16.0 112.92 187.64 300.56 OK
r-release-macos-arm64 1.16.0 21.00 42.00 63.00 OK
r-release-macos-x86_64 1.16.0 58.00 184.00 242.00 OK
r-release-windows-x86_64 1.16.0 120.00 247.00 367.00 OK
r-oldrel-macos-arm64 1.16.0 17.00 49.00 66.00 OK
r-oldrel-macos-x86_64 1.16.0 66.00 332.00 398.00 OK
r-oldrel-windows-x86_64 1.16.0 137.00 333.00 470.00 OK

Check Details

Version: 1.16.0
Check: R code for possible problems
Result: NOTE Found calls to structure() using deprecated special names: vcfR/tests/testthat/test_genetic_diff.R (.Dim: 2, .Dimnames: 2, .Label: 1) vcfR/tests/testthat/test_genotype_matrix_functions.R (.Dim: 1, .Dimnames: 1) '.Dim' should be changed to 'dim'. '.Dimnames' should be changed to 'dimnames'. '.Label' should be changed to 'levels'. Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-gcc, r-devel-windows-x86_64

Version: 1.16.0
Check: for new files in some other directories
Result: NOTE Found the following files/directories: ‘~/tmp/scratch/Rtmp0kV8qP’ ‘~/tmp/scratch/Rtmp1hEJpR’ ‘~/tmp/scratch/Rtmp2t7PxV’ ‘~/tmp/scratch/Rtmp3knCof’ ‘~/tmp/scratch/Rtmp4MRAGD’ ‘~/tmp/scratch/Rtmp4YWlj8’ ‘~/tmp/scratch/Rtmp4izyYw’ ‘~/tmp/scratch/Rtmp5GoLyW’ ‘~/tmp/scratch/Rtmp5TSZJD’ ‘~/tmp/scratch/Rtmp5o7owU’ ‘~/tmp/scratch/Rtmp641c6R’ ‘~/tmp/scratch/Rtmp64UmhP’ ‘~/tmp/scratch/Rtmp6IIGSb’ ‘~/tmp/scratch/Rtmp6MBFiY’ ‘~/tmp/scratch/Rtmp6fxDhk’ ‘~/tmp/scratch/Rtmp7W71XW’ ‘~/tmp/scratch/Rtmp89Q7bS’ ‘~/tmp/scratch/Rtmp8jqCde’ ‘~/tmp/scratch/Rtmp8pgQii’ ‘~/tmp/scratch/Rtmp92inuH’ ‘~/tmp/scratch/Rtmp9ecLCf’ ‘~/tmp/scratch/Rtmp9hXYNP’ ‘~/tmp/scratch/RtmpAHHKy9’ ‘~/tmp/scratch/RtmpALOMfq’ ‘~/tmp/scratch/RtmpB5c8zg’ ‘~/tmp/scratch/RtmpBBDvKD’ ‘~/tmp/scratch/RtmpBGtjOD’ ‘~/tmp/scratch/RtmpBH6q8b’ ‘~/tmp/scratch/RtmpCA0Bgu’ ‘~/tmp/scratch/RtmpCiBcyK’ ‘~/tmp/scratch/RtmpCkM7H0’ ‘~/tmp/scratch/RtmpDKaAEt’ ‘~/tmp/scratch/RtmpDMwJnk’ ‘~/tmp/scratch/RtmpDmacff’ ‘~/tmp/scratch/RtmpDzg9Dk’ ‘~/tmp/scratch/RtmpEJzyRZ’ ‘~/tmp/scratch/RtmpEZ0M5a’ ‘~/tmp/scratch/RtmpF12EW3’ ‘~/tmp/scratch/RtmpFY68dz’ ‘~/tmp/scratch/RtmpFtZIkq’ ‘~/tmp/scratch/RtmpGioyMo’ ‘~/tmp/scratch/RtmpHCh28g’ ‘~/tmp/scratch/RtmpHXN5ej’ ‘~/tmp/scratch/RtmpHbp6X5’ ‘~/tmp/scratch/RtmpHeicuQ’ ‘~/tmp/scratch/RtmpHrDbag’ ‘~/tmp/scratch/RtmpHyGt7E’ ‘~/tmp/scratch/RtmpIXmntA’ ‘~/tmp/scratch/RtmpIeJRdz’ ‘~/tmp/scratch/RtmpIemaWs’ ‘~/tmp/scratch/RtmpIuZLu0’ ‘~/tmp/scratch/RtmpJ3G15O’ ‘~/tmp/scratch/RtmpJuxYmK’ ‘~/tmp/scratch/RtmpKitncP’ ‘~/tmp/scratch/RtmpL7AeHp’ ‘~/tmp/scratch/RtmpL7jCxB’ ‘~/tmp/scratch/RtmpL8iRyg’ ‘~/tmp/scratch/RtmpLNt6QF’ ‘~/tmp/scratch/RtmpLQKjWq’ ‘~/tmp/scratch/RtmpLi8CPt’ ‘~/tmp/scratch/RtmpLzwJvA’ ‘~/tmp/scratch/RtmpMAxBiO’ ‘~/tmp/scratch/RtmpMD1AmD’ ‘~/tmp/scratch/RtmpMX8SEh’ ‘~/tmp/scratch/RtmpMhHuP9’ ‘~/tmp/scratch/RtmpMs3nre’ ‘~/tmp/scratch/RtmpN1Ftoj’ ‘~/tmp/scratch/RtmpNhiwb4’ ‘~/tmp/scratch/RtmpPFef8q’ ‘~/tmp/scratch/RtmpPXAuVC’ ‘~/tmp/scratch/RtmpPle0lA’ ‘~/tmp/scratch/RtmpQWEbPI’ ‘~/tmp/scratch/RtmpQZHIoF’ ‘~/tmp/scratch/RtmpRJocPs’ ‘~/tmp/scratch/RtmpRKvUK2’ ‘~/tmp/scratch/RtmpRS51OF’ ‘~/tmp/scratch/RtmpRWTYxb’ ‘~/tmp/scratch/RtmpRxSCSK’ ‘~/tmp/scratch/RtmpTY6USw’ ‘~/tmp/scratch/RtmpTfkAsu’ ‘~/tmp/scratch/RtmpUMAFg1’ ‘~/tmp/scratch/RtmpWAtQkQ’ ‘~/tmp/scratch/RtmpWO7Xnh’ ‘~/tmp/scratch/RtmpWeOV0K’ ‘~/tmp/scratch/RtmpX3CEgJ’ ‘~/tmp/scratch/RtmpY7Io5M’ ‘~/tmp/scratch/RtmpYJKPF6’ ‘~/tmp/scratch/RtmpYZ6pno’ ‘~/tmp/scratch/RtmpYiFchK’ ‘~/tmp/scratch/RtmpZ4tQDq’ ‘~/tmp/scratch/RtmpZFFOVA’ ‘~/tmp/scratch/RtmpZNfz0R’ ‘~/tmp/scratch/RtmpZx4XWQ’ ‘~/tmp/scratch/Rtmpa8rjbw’ ‘~/tmp/scratch/RtmpayYnhy’ ‘~/tmp/scratch/RtmpbtD738’ ‘~/tmp/scratch/Rtmpbx5hVf’ ‘~/tmp/scratch/Rtmpc4Bka0’ ‘~/tmp/scratch/Rtmpc5yAAa’ ‘~/tmp/scratch/RtmpcJu46b’ ‘~/tmp/scratch/RtmpcZvQaB’ ‘~/tmp/scratch/Rtmpd5jMHv’ ‘~/tmp/scratch/RtmpdX990p’ ‘~/tmp/scratch/Rtmpdu3O4F’ ‘~/tmp/scratch/Rtmpe8wU1a’ ‘~/tmp/scratch/RtmpeljWHB’ ‘~/tmp/scratch/RtmpetABR7’ ‘~/tmp/scratch/RtmpfCO4q6’ ‘~/tmp/scratch/RtmpfRzjfP’ ‘~/tmp/scratch/RtmpfbyTC0’ ‘~/tmp/scratch/Rtmpg9m2CD’ ‘~/tmp/scratch/RtmpgHPvUH’ ‘~/tmp/scratch/RtmpgLKLHD’ ‘~/tmp/scratch/Rtmph376fI’ ‘~/tmp/scratch/RtmphA5Ylj’ ‘~/tmp/scratch/RtmphFb7ER’ ‘~/tmp/scratch/RtmphKaHlJ’ ‘~/tmp/scratch/RtmphLWwn1’ ‘~/tmp/scratch/RtmphgcllE’ ‘~/tmp/scratch/Rtmphnk15G’ ‘~/tmp/scratch/Rtmpi0hKNE’ ‘~/tmp/scratch/RtmpiCL99m’ ‘~/tmp/scratch/Rtmpj3ryMY’ ‘~/tmp/scratch/RtmpjhIGz9’ ‘~/tmp/scratch/Rtmpk1j6FY’ ‘~/tmp/scratch/Rtmpk3kMz0’ ‘~/tmp/scratch/RtmpkPIvlU’ ‘~/tmp/scratch/RtmpkV44BQ’ ‘~/tmp/scratch/RtmplULolH’ ‘~/tmp/scratch/RtmploqgvS’ ‘~/tmp/scratch/RtmpmkmTU7’ ‘~/tmp/scratch/RtmpnvQdaH’ ‘~/tmp/scratch/RtmpoGDo98’ ‘~/tmp/scratch/RtmpoyfhbW’ ‘~/tmp/scratch/RtmppguH9q’ ‘~/tmp/scratch/RtmppkOexE’ ‘~/tmp/scratch/RtmpppgWa5’ ‘~/tmp/scratch/RtmpqRLMxN’ ‘~/tmp/scratch/RtmprgW905’ ‘~/tmp/scratch/RtmpsOzonz’ ‘~/tmp/scratch/RtmptyELKF’ ‘~/tmp/scratch/RtmpubST31’ ‘~/tmp/scratch/RtmpvPj3UU’ ‘~/tmp/scratch/RtmpvXrGcg’ ‘~/tmp/scratch/RtmpwiRwNp’ ‘~/tmp/scratch/RtmpxQCQLR’ ‘~/tmp/scratch/RtmpxhD4Tz’ ‘~/tmp/scratch/Rtmpy2WbS0’ ‘~/tmp/scratch/Rtmpy3ExDi’ ‘~/tmp/scratch/Rtmpy42Xm3’ ‘~/tmp/scratch/Rtmpy9G1M5’ ‘~/tmp/scratch/RtmpyY0nJN’ ‘~/tmp/scratch/Rtmpye45tC’ ‘~/tmp/scratch/RtmpyjbJPU’ ‘~/tmp/scratch/RtmpzMhQ0v’ ‘~/tmp/scratch/xvfb-run.130xZx’ ‘~/tmp/scratch/xvfb-run.1QJ1dj’ ‘~/tmp/scratch/xvfb-run.1jFJ4J’ ‘~/tmp/scratch/xvfb-run.266fc8’ ‘~/tmp/scratch/xvfb-run.3AAnyI’ ‘~/tmp/scratch/xvfb-run.5tCyJe’ ‘~/tmp/scratch/xvfb-run.7SMMhU’ ‘~/tmp/scratch/xvfb-run.8RNyWF’ ‘~/tmp/scratch/xvfb-run.CeV4FG’ ‘~/tmp/scratch/xvfb-run.CiWM3U’ ‘~/tmp/scratch/xvfb-run.E41ia9’ ‘~/tmp/scratch/xvfb-run.EnX6mi’ ‘~/tmp/scratch/xvfb-run.H1HtDL’ ‘~/tmp/scratch/xvfb-run.HCFG0u’ ‘~/tmp/scratch/xvfb-run.IyD4N3’ ‘~/tmp/scratch/xvfb-run.KlDqKu’ ‘~/tmp/scratch/xvfb-run.MD4H3j’ ‘~/tmp/scratch/xvfb-run.MVcLEt’ ‘~/tmp/scratch/xvfb-run.O695c1’ ‘~/tmp/scratch/xvfb-run.OZexYW’ ‘~/tmp/scratch/xvfb-run.OgCFMc’ ‘~/tmp/scratch/xvfb-run.PL2S2k’ ‘~/tmp/scratch/xvfb-run.SGlhFX’ ‘~/tmp/scratch/xvfb-run.USsve8’ ‘~/tmp/scratch/xvfb-run.UVbwJC’ ‘~/tmp/scratch/xvfb-run.V42orJ’ ‘~/tmp/scratch/xvfb-run.W5mTVd’ ‘~/tmp/scratch/xvfb-run.WgFKkU’ ‘~/tmp/scratch/xvfb-run.WiGiyP’ ‘~/tmp/scratch/xvfb-run.XPDv9T’ ‘~/tmp/scratch/xvfb-run.XzF6WW’ ‘~/tmp/scratch/xvfb-run.YL1J88’ ‘~/tmp/scratch/xvfb-run.YQRhZ9’ ‘~/tmp/scratch/xvfb-run.aRi2z5’ ‘~/tmp/scratch/xvfb-run.bD3yqf’ ‘~/tmp/scratch/xvfb-run.bUHl0p’ ‘~/tmp/scratch/xvfb-run.dcJLTi’ ‘~/tmp/scratch/xvfb-run.elcoW7’ ‘~/tmp/scratch/xvfb-run.ev7dgb’ ‘~/tmp/scratch/xvfb-run.frcOkb’ ‘~/tmp/scratch/xvfb-run.gUZgEp’ ‘~/tmp/scratch/xvfb-run.h8lrCf’ ‘~/tmp/scratch/xvfb-run.hNryvZ’ ‘~/tmp/scratch/xvfb-run.i65N4w’ ‘~/tmp/scratch/xvfb-run.iK9HB1’ ‘~/tmp/scratch/xvfb-run.mkg4Bm’ ‘~/tmp/scratch/xvfb-run.n79K26’ ‘~/tmp/scratch/xvfb-run.nBnEfv’ ‘~/tmp/scratch/xvfb-run.nvTnhE’ ‘~/tmp/scratch/xvfb-run.oBPjbJ’ ‘~/tmp/scratch/xvfb-run.oL29Wn’ ‘~/tmp/scratch/xvfb-run.pNc9KO’ ‘~/tmp/scratch/xvfb-run.pdVgFW’ ‘~/tmp/scratch/xvfb-run.ptG1ua’ ‘~/tmp/scratch/xvfb-run.pzS329’ ‘~/tmp/scratch/xvfb-run.rGNcWf’ ‘~/tmp/scratch/xvfb-run.rxJDEz’ ‘~/tmp/scratch/xvfb-run.tJufAc’ ‘~/tmp/scratch/xvfb-run.vP37AK’ ‘~/tmp/scratch/xvfb-run.vQqruA’ ‘~/tmp/scratch/xvfb-run.xSblMK’ ‘~/tmp/scratch/xvfb-run.xT0rzg’ ‘~/tmp/scratch/xvfb-run.xUaGnx’ ‘~/tmp/scratch/xvfb-run.xgEEpO’ ‘~/tmp/scratch/xvfb-run.yBpopg’ ‘~/tmp/scratch/xvfb-run.yCsyiC’ ‘~/tmp/scratch/xvfb-run.yeJdOf’ ‘~/tmp/scratch/xvfb-run.zskWfS’ Flavor: r-devel-linux-x86_64-debian-gcc