Last updated on 2026-08-03 09:50:48 CEST.
| Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
|---|---|---|---|---|---|---|
| r-devel-linux-x86_64-debian-clang | 1.1 | 2.51 | 38.68 | 41.19 | ERROR | |
| r-devel-linux-x86_64-debian-gcc | 1.1 | 1.45 | 29.14 | 30.59 | ERROR | |
| r-devel-linux-x86_64-fedora-clang | 1.1 | 58.78 | ERROR | |||
| r-devel-linux-x86_64-fedora-gcc | 1.1 | 34.84 | ERROR | |||
| r-devel-windows-x86_64 | 1.1 | 3.00 | 64.00 | 67.00 | ERROR | |
| r-patched-linux-x86_64 | 1.1 | 2.61 | 67.50 | 70.11 | OK | |
| r-release-linux-x86_64 | 1.1 | 2.23 | 68.29 | 70.52 | OK | |
| r-release-macos-arm64 | 1.1 | 1.00 | 23.00 | 24.00 | OK | |
| r-release-macos-x86_64 | 1.1 | 2.00 | 104.00 | 106.00 | OK | |
| r-release-windows-x86_64 | 1.1 | 4.00 | 100.00 | 104.00 | OK | |
| r-oldrel-macos-arm64 | 1.1 | OK | ||||
| r-oldrel-macos-x86_64 | 1.1 | 2.00 | 92.00 | 94.00 | OK | |
| r-oldrel-windows-x86_64 | 1.1 | 5.00 | 114.00 | 119.00 | OK |
Version: 1.1
Check: examples
Result: ERROR
Running examples in ‘resde-Ex.R’ failed
The error most likely occurred in:
> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: sdefit
> ### Title: Fit SDE model
> ### Aliases: sdefit
>
> ### ** Examples
>
> m <- sdemodel(phi=~x^c, beta0=~b*a^c, beta1=~-b)
Model:
y = phi(x, c) = x^c
y' = phiprime(x, c) = c * x^(c - 1)
dY = (b * a^c + -b * Y) dt + sigmap * dW
Y(0) = phi(0, c)
yi = Y(ti) + sigmam * ei
Parameters:
a, b, c
> mod1 <- sdefit(m, "height", "age", data=Loblolly[Loblolly$Seed=="301",],
+ start=c(a=70, b=0.1, c=1))
Warning: Solution at boundary, it may be a local optimum. Compare logLik with mum = 0
> mod2 <- sdefit(m, "height", "age", "Seed", Loblolly, global=c(b=0.1, c=0.5),
+ local=c(a=72))
Warning in reorder(lower) :
different names for ‘start’ and ‘lower’: not reordering to match
Warning in reorder(upper) :
different names for ‘start’ and ‘upper’: not reordering to match
Error in nls(frml, data, start = start, control = control, algorithm = "port", :
Convergence failure: initial par violates constraints
Calls: sdefit -> nls
Execution halted
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc
Version: 1.1
Check: re-building of vignette outputs
Result: ERROR
Error(s) in re-building vignettes:
...
--- re-building ‘resde-vignette.Rnw’ using knitr
Quitting from resde-vignette.Rnw:401-406 [unnamed-chunk-15]
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
missing value where TRUE/FALSE needed
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
Quitting from resde-vignette.Rnw:401-406 [unnamed-chunk-15]
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
if (any(unlist(start) < low) || any(unlist(start) > upp)) {, iv[1L] <- 300, return(if (give.v) list(iv = iv, v = v[seq_len(18L)]) else iv), }
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
Error: processing vignette 'resde-vignette.Rnw' failed with diagnostics:
missing value where TRUE/FALSE needed
--- failed re-building ‘resde-vignette.Rnw’
SUMMARY: processing the following file failed:
‘resde-vignette.Rnw’
Error: Vignette re-building failed.
Execution halted
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc
Version: 1.1
Check: for new files in some other directories
Result: NOTE
Found the following files/directories:
‘~/tmp/scratch/Rtmp10NH88’ ‘~/tmp/scratch/Rtmp1NHw5Q’
‘~/tmp/scratch/Rtmp1aapqe’ ‘~/tmp/scratch/Rtmp24Pt35’
‘~/tmp/scratch/Rtmp2JpSPM’ ‘~/tmp/scratch/Rtmp2VJham’
‘~/tmp/scratch/Rtmp2aQXbW’ ‘~/tmp/scratch/Rtmp2j1eCk’
‘~/tmp/scratch/Rtmp2vrtc5’ ‘~/tmp/scratch/Rtmp3xD8lL’
‘~/tmp/scratch/Rtmp43Bz6E’ ‘~/tmp/scratch/Rtmp4Vsa37’
‘~/tmp/scratch/Rtmp4Z3gag’ ‘~/tmp/scratch/Rtmp5BPslU’
‘~/tmp/scratch/Rtmp5Gdn7W’ ‘~/tmp/scratch/Rtmp6fjjpp’
‘~/tmp/scratch/Rtmp7racqj’ ‘~/tmp/scratch/Rtmp95wXTK’
‘~/tmp/scratch/Rtmp9QrgDx’ ‘~/tmp/scratch/Rtmp9Uoly7’
‘~/tmp/scratch/RtmpA0Wzim’ ‘~/tmp/scratch/RtmpAF0Y26’
‘~/tmp/scratch/RtmpAGjo0k’ ‘~/tmp/scratch/RtmpAcjZDy’
‘~/tmp/scratch/RtmpBGNKFo’ ‘~/tmp/scratch/RtmpBGzxyG’
‘~/tmp/scratch/RtmpBUXGwA’ ‘~/tmp/scratch/RtmpCgCp9K’
‘~/tmp/scratch/RtmpCiFXuU’ ‘~/tmp/scratch/RtmpDGaW9v’
‘~/tmp/scratch/RtmpDKKyDd’ ‘~/tmp/scratch/RtmpDZRYtS’
‘~/tmp/scratch/RtmpEfheWu’ ‘~/tmp/scratch/RtmpFXFDKt’
‘~/tmp/scratch/RtmpFwYHcC’ ‘~/tmp/scratch/RtmpG3QfgJ’
‘~/tmp/scratch/RtmpGrbUFC’ ‘~/tmp/scratch/RtmpHTncbO’
‘~/tmp/scratch/RtmpHfIt3Y’ ‘~/tmp/scratch/RtmpHh1whN’
‘~/tmp/scratch/RtmpHvM5dI’ ‘~/tmp/scratch/RtmpIrdSLg’
‘~/tmp/scratch/RtmpJnDh4K’ ‘~/tmp/scratch/RtmpJoc4WC’
‘~/tmp/scratch/RtmpKHKQes’ ‘~/tmp/scratch/RtmpKXmESA’
‘~/tmp/scratch/RtmpMAoFZL’ ‘~/tmp/scratch/RtmpMBGSPL’
‘~/tmp/scratch/RtmpMX91BK’ ‘~/tmp/scratch/RtmpMhqpF9’
‘~/tmp/scratch/RtmpNorjIm’ ‘~/tmp/scratch/RtmpOImM1E’
‘~/tmp/scratch/RtmpP5bG5R’ ‘~/tmp/scratch/RtmpQpb0CR’
‘~/tmp/scratch/RtmpQySMbf’ ‘~/tmp/scratch/RtmpR65kAD’
‘~/tmp/scratch/RtmpRiFrgV’ ‘~/tmp/scratch/RtmpS4jV3G’
‘~/tmp/scratch/RtmpS9FbDe’ ‘~/tmp/scratch/RtmpSGhosh’
‘~/tmp/scratch/RtmpTi8N6Y’ ‘~/tmp/scratch/RtmpU7iWdb’
‘~/tmp/scratch/RtmpVe1t23’ ‘~/tmp/scratch/RtmpW47BMl’
‘~/tmp/scratch/RtmpXRmHJs’ ‘~/tmp/scratch/RtmpYLcbe6’
‘~/tmp/scratch/RtmpZtB1Y5’ ‘~/tmp/scratch/RtmpaBsjBp’
‘~/tmp/scratch/Rtmpb9tjxA’ ‘~/tmp/scratch/Rtmpbm5ktO’
‘~/tmp/scratch/RtmpdaJS01’ ‘~/tmp/scratch/RtmpejLU1y’
‘~/tmp/scratch/RtmpflCU3u’ ‘~/tmp/scratch/Rtmpfpfd6k’
‘~/tmp/scratch/RtmpgCYfCv’ ‘~/tmp/scratch/RtmphsmRFl’
‘~/tmp/scratch/RtmphwiLnF’ ‘~/tmp/scratch/RtmpiCOR6L’
‘~/tmp/scratch/Rtmpj4nM0d’ ‘~/tmp/scratch/RtmpjBSEtv’
‘~/tmp/scratch/RtmpjHg28A’ ‘~/tmp/scratch/RtmpjRbnEZ’
‘~/tmp/scratch/Rtmpjoqim5’ ‘~/tmp/scratch/Rtmpjv7br3’
‘~/tmp/scratch/Rtmpjxn6G7’ ‘~/tmp/scratch/RtmpkAc0tv’
‘~/tmp/scratch/RtmpkrynyJ’ ‘~/tmp/scratch/Rtmpl3KEeR’
‘~/tmp/scratch/RtmplojCfA’ ‘~/tmp/scratch/Rtmpm327hg’
‘~/tmp/scratch/Rtmpm3mC6g’ ‘~/tmp/scratch/Rtmpn819js’
‘~/tmp/scratch/RtmpnXtzTM’ ‘~/tmp/scratch/Rtmpo5t2Cz’
‘~/tmp/scratch/RtmpoD8ImF’ ‘~/tmp/scratch/Rtmppv8bel’
‘~/tmp/scratch/Rtmpqo0qa3’ ‘~/tmp/scratch/RtmpqsArW7’
‘~/tmp/scratch/RtmprKC2LF’ ‘~/tmp/scratch/Rtmpreexx6’
‘~/tmp/scratch/Rtmps5nj5S’ ‘~/tmp/scratch/RtmpsYgNEi’
‘~/tmp/scratch/RtmptRJXDn’ ‘~/tmp/scratch/Rtmpu7EZrD’
‘~/tmp/scratch/RtmpuAdjpp’ ‘~/tmp/scratch/RtmpuNpOxV’
‘~/tmp/scratch/RtmpvbmYb4’ ‘~/tmp/scratch/RtmpvfwOvr’
‘~/tmp/scratch/RtmpvgrLz9’ ‘~/tmp/scratch/RtmpvhvNTS’
‘~/tmp/scratch/Rtmpw7XsOe’ ‘~/tmp/scratch/Rtmpx4ZC1B’
‘~/tmp/scratch/Rtmpxojogy’ ‘~/tmp/scratch/Rtmpy7fWmI’
‘~/tmp/scratch/RtmpyLKLDS’ ‘~/tmp/scratch/Rtmpz2h8DT’
‘~/tmp/scratch/Rtmpz4JBRw’ ‘~/tmp/scratch/xvfb-run.0kyxpL’
‘~/tmp/scratch/xvfb-run.1Lszu6’ ‘~/tmp/scratch/xvfb-run.1UUyI1’
‘~/tmp/scratch/xvfb-run.3ezYUI’ ‘~/tmp/scratch/xvfb-run.8HlG4T’
‘~/tmp/scratch/xvfb-run.AeLQVt’ ‘~/tmp/scratch/xvfb-run.DJGYgx’
‘~/tmp/scratch/xvfb-run.FSKyzl’ ‘~/tmp/scratch/xvfb-run.Hem2sJ’
‘~/tmp/scratch/xvfb-run.IHt1QT’ ‘~/tmp/scratch/xvfb-run.K6cGCR’
‘~/tmp/scratch/xvfb-run.KyGR8u’ ‘~/tmp/scratch/xvfb-run.Lbkgjk’
‘~/tmp/scratch/xvfb-run.N8U9ut’ ‘~/tmp/scratch/xvfb-run.NOOVyo’
‘~/tmp/scratch/xvfb-run.NuPI52’ ‘~/tmp/scratch/xvfb-run.P1mifR’
‘~/tmp/scratch/xvfb-run.Qk95J3’ ‘~/tmp/scratch/xvfb-run.QmdxD8’
‘~/tmp/scratch/xvfb-run.RZEsk7’ ‘~/tmp/scratch/xvfb-run.SpZiTf’
‘~/tmp/scratch/xvfb-run.U3p3Zv’ ‘~/tmp/scratch/xvfb-run.W3P7fe’
‘~/tmp/scratch/xvfb-run.WOimNS’ ‘~/tmp/scratch/xvfb-run.Zqdto7’
‘~/tmp/scratch/xvfb-run.aW2Il5’ ‘~/tmp/scratch/xvfb-run.cXxvqu’
‘~/tmp/scratch/xvfb-run.dMXW0I’ ‘~/tmp/scratch/xvfb-run.fLaFA0’
‘~/tmp/scratch/xvfb-run.htnCO6’ ‘~/tmp/scratch/xvfb-run.jorNVw’
‘~/tmp/scratch/xvfb-run.opXsDy’ ‘~/tmp/scratch/xvfb-run.qZbadZ’
‘~/tmp/scratch/xvfb-run.s4I3bi’ ‘~/tmp/scratch/xvfb-run.ttkHZH’
‘~/tmp/scratch/xvfb-run.wiePW3’ ‘~/tmp/scratch/xvfb-run.wyMgxG’
‘~/tmp/scratch/xvfb-run.y9w1Dh’ ‘~/tmp/scratch/xvfb-run.yLqP0g’
‘~/tmp/scratch/xvfb-run.yQMT8B’ ‘~/tmp/scratch/xvfb-run.yl0nTf’
Flavor: r-devel-linux-x86_64-debian-gcc
Version: 1.1
Check: examples
Result: ERROR
Running examples in ‘resde-Ex.R’ failed
The error most likely occurred in:
> ### Name: sdefit
> ### Title: Fit SDE model
> ### Aliases: sdefit
>
> ### ** Examples
>
> m <- sdemodel(phi=~x^c, beta0=~b*a^c, beta1=~-b)
Model:
y = phi(x, c) = x^c
y' = phiprime(x, c) = c * x^(c - 1)
dY = (b * a^c + -b * Y) dt + sigmap * dW
Y(0) = phi(0, c)
yi = Y(ti) + sigmam * ei
Parameters:
a, b, c
> mod1 <- sdefit(m, "height", "age", data=Loblolly[Loblolly$Seed=="301",],
+ start=c(a=70, b=0.1, c=1))
Warning: Solution at boundary, it may be a local optimum. Compare logLik with mum = 0
> mod2 <- sdefit(m, "height", "age", "Seed", Loblolly, global=c(b=0.1, c=0.5),
+ local=c(a=72))
Warning in reorder(lower) :
different names for ‘start’ and ‘lower’: not reordering to match
Warning in reorder(upper) :
different names for ‘start’ and ‘upper’: not reordering to match
Error in nls(frml, data, start = start, control = control, algorithm = "port", :
Convergence failure: initial par violates constraints
Calls: sdefit -> nls
Execution halted
Flavors: r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-windows-x86_64
Version: 1.1
Check: re-building of vignette outputs
Result: ERROR
Error(s) in re-building vignettes:
--- re-building ‘resde-vignette.Rnw’ using knitr
Quitting from resde-vignette.Rnw:401-406 [unnamed-chunk-15]
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
missing value where TRUE/FALSE needed
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
Quitting from resde-vignette.Rnw:401-406 [unnamed-chunk-15]
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
if (any(unlist(start) < low) || any(unlist(start) > upp)) {, iv[1L] <- 300, return(if (give.v) list(iv = iv, v = v[seq_len(18L)]) else iv), }
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
Error: processing vignette 'resde-vignette.Rnw' failed with diagnostics:
missing value where TRUE/FALSE needed
--- failed re-building ‘resde-vignette.Rnw’
SUMMARY: processing the following file failed:
‘resde-vignette.Rnw’
Error: Vignette re-building failed.
Execution halted
Flavors: r-devel-linux-x86_64-fedora-clang, r-devel-windows-x86_64
Version: 1.1
Check: re-building of vignette outputs
Result: ERROR
Error(s) in re-building vignettes:
--- re-building ‘resde-vignette.Rnw’ using knitr
Quitting from resde-vignette.Rnw:401-406 [unnamed-chunk-15]
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
<error/rlang_error>
Error in `if (any(unlist(start) < low) || any(unlist(start) > upp)) ...`:
! missing value where TRUE/FALSE needed
---
Backtrace:
x
1. \-resde::sdefit(...)
2. \-stats::nls(...)
3. \-stats:::nls_port_fit(...)
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
Error: processing vignette 'resde-vignette.Rnw' failed with diagnostics:
missing value where TRUE/FALSE needed
--- failed re-building ‘resde-vignette.Rnw’
SUMMARY: processing the following file failed:
‘resde-vignette.Rnw’
Error: Vignette re-building failed.
Execution halted
Flavor: r-devel-linux-x86_64-fedora-gcc