CRAN Package Check Results for Package jackstraw

Last updated on 2026-07-13 15:50:40 CEST.

Flavor	Version	T_install	T_check	T_total	Status
r-devel-linux-x86_64-debian-clang	1.3.21	2.36	55.71	58.07	OK
r-devel-linux-x86_64-debian-gcc	1.3.21	2.64	41.03	43.67	ERROR
r-devel-linux-x86_64-fedora-clang	1.3.21	6.00	88.71	94.71	ERROR
r-devel-linux-x86_64-fedora-gcc	1.3.21			88.19	ERROR
r-devel-windows-x86_64	1.3.21	8.00	76.00	84.00	ERROR
r-patched-linux-x86_64	1.3.21	4.15	51.18	55.33	OK
r-release-linux-x86_64	1.3.21	3.25	50.95	54.20	OK
r-release-macos-arm64	1.3.21	1.00	15.00	16.00	OK
r-release-macos-x86_64	1.3.21	3.00	82.00	85.00	OK
r-release-windows-x86_64	1.3.21	6.00	75.00	81.00	OK
r-oldrel-macos-arm64	1.3.21	1.00	15.00	16.00	OK
r-oldrel-macos-x86_64	1.3.21	3.00	76.00	79.00	OK
r-oldrel-windows-x86_64	1.3.21	7.00	94.00	101.00	OK

Check Details

Version: 1.3.21
Check: tests
Result: ERROR Running ‘testthat.R’ [11s/13s] Running the tests in ‘tests/testthat.R’ failed. Complete output: > library(testthat) > library(jackstraw) > > test_check("jackstraw") Saving _problems/test-jackstraw-741.R Saving _problems/test-jackstraw-756.R Saving _problems/test-jackstraw-767.R [ FAIL 3 | WARN 1 | SKIP 0 | PASS 1115 ] ══ Failed tests ════════════════════════════════════════════════════════════════ ── Failure ('test-jackstraw.R:739:5'): jackstraw_pam works ───────────────────── Expected `obj <- jackstraw_pam(Xc, pam.dat = pam.dat, s = s, B = B, verbose = FALSE)` to run silently. Actual noise: warnings. ── Failure ('test-jackstraw.R:754:5'): jackstraw_pam works ───────────────────── Expected `obj <- jackstraw_pam(Xc, pam.dat = pam.dat, s = s, B = 1, verbose = FALSE)` to run silently. Actual noise: warnings. ── Failure ('test-jackstraw.R:765:5'): jackstraw_pam works ───────────────────── Expected `... <- NULL` to run silently. Actual noise: warnings. [ FAIL 3 | WARN 1 | SKIP 0 | PASS 1115 ] Error: ! Test failures. Execution halted Flavor: r-devel-linux-x86_64-debian-gcc

Version: 1.3.21
Check: tests
Result: ERROR Running ‘testthat.R’ [28s/49s] Running the tests in ‘tests/testthat.R’ failed. Complete output: > library(testthat) > library(jackstraw) > > test_check("jackstraw") Saving _problems/test-jackstraw-741.R Saving _problems/test-jackstraw-756.R Saving _problems/test-jackstraw-767.R [ FAIL 3 | WARN 1 | SKIP 0 | PASS 1115 ] ══ Failed tests ════════════════════════════════════════════════════════════════ ── Failure ('test-jackstraw.R:739:5'): jackstraw_pam works ───────────────────── Expected `obj <- jackstraw_pam(Xc, pam.dat = pam.dat, s = s, B = B, verbose = FALSE)` to run silently. Actual noise: warnings. ── Failure ('test-jackstraw.R:754:5'): jackstraw_pam works ───────────────────── Expected `obj <- jackstraw_pam(Xc, pam.dat = pam.dat, s = s, B = 1, verbose = FALSE)` to run silently. Actual noise: warnings. ── Failure ('test-jackstraw.R:765:5'): jackstraw_pam works ───────────────────── Expected `... <- NULL` to run silently. Actual noise: warnings. [ FAIL 3 | WARN 1 | SKIP 0 | PASS 1115 ] Error: ! Test failures. Execution halted Flavor: r-devel-linux-x86_64-fedora-clang

Version: 1.3.21
Check: tests
Result: ERROR Running ‘testthat.R’ [27s/44s] Running the tests in ‘tests/testthat.R’ failed. Complete output: > library(testthat) > library(jackstraw) > > test_check("jackstraw") Saving _problems/test-jackstraw-741.R Saving _problems/test-jackstraw-756.R Saving _problems/test-jackstraw-767.R [ FAIL 3 | WARN 1 | SKIP 0 | PASS 1115 ] ══ Failed tests ════════════════════════════════════════════════════════════════ ── Failure ('test-jackstraw.R:739:5'): jackstraw_pam works ───────────────────── Expected `obj <- jackstraw_pam(Xc, pam.dat = pam.dat, s = s, B = B, verbose = FALSE)` to run silently. Actual noise: warnings. ── Failure ('test-jackstraw.R:754:5'): jackstraw_pam works ───────────────────── Expected `obj <- jackstraw_pam(Xc, pam.dat = pam.dat, s = s, B = 1, verbose = FALSE)` to run silently. Actual noise: warnings. ── Failure ('test-jackstraw.R:765:5'): jackstraw_pam works ───────────────────── Expected `... <- NULL` to run silently. Actual noise: warnings. [ FAIL 3 | WARN 1 | SKIP 0 | PASS 1115 ] Error: ! Test failures. Execution halted Flavor: r-devel-linux-x86_64-fedora-gcc

Version: 1.3.21
Check: tests
Result: ERROR Running 'testthat.R' [17s] Running the tests in 'tests/testthat.R' failed. Complete output: > library(testthat) > library(jackstraw) > > test_check("jackstraw") Saving _problems/test-jackstraw-741.R Saving _problems/test-jackstraw-756.R Saving _problems/test-jackstraw-767.R [ FAIL 3 | WARN 1 | SKIP 0 | PASS 1115 ] ══ Failed tests ════════════════════════════════════════════════════════════════ ── Failure ('test-jackstraw.R:739:5'): jackstraw_pam works ───────────────────── Expected `obj <- jackstraw_pam(Xc, pam.dat = pam.dat, s = s, B = B, verbose = FALSE)` to run silently. Actual noise: warnings. ── Failure ('test-jackstraw.R:754:5'): jackstraw_pam works ───────────────────── Expected `obj <- jackstraw_pam(Xc, pam.dat = pam.dat, s = s, B = 1, verbose = FALSE)` to run silently. Actual noise: warnings. ── Failure ('test-jackstraw.R:765:5'): jackstraw_pam works ───────────────────── Expected `... <- NULL` to run silently. Actual noise: warnings. [ FAIL 3 | WARN 1 | SKIP 0 | PASS 1115 ] Error: ! Test failures. Execution halted Flavor: r-devel-windows-x86_64

Version: 1.3.21
Check: tests
Result: ERROR Running 'testthat.R' [22s] Running the tests in 'tests/testthat.R' failed. Complete output: > library(testthat) > library(jackstraw) > > test_check("jackstraw") Saving _problems/test-jackstraw-257.R [ FAIL 1 | WARN 0 | SKIP 0 | PASS 1117 ] ══ Failed tests ════════════════════════════════════════════════════════════════ ── Failure ('test-jackstraw.R:257:5'): permute_alleles_from_geno works ───────── Expected `any(y == 1L)` to be TRUE. Differences: `actual`: FALSE `expected`: TRUE [ FAIL 1 | WARN 0 | SKIP 0 | PASS 1117 ] Error: ! Test failures. Execution halted Flavor: r-oldrel-windows-x86_64