Last updated on 2026-08-02 21:53:25 CEST.
| Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
|---|---|---|---|---|---|---|
| r-devel-linux-x86_64-debian-clang | 1.42.2 | 15.00 | 154.52 | 169.52 | NOTE | |
| r-devel-linux-x86_64-debian-gcc | 1.42.2 | 11.27 | 115.30 | 126.57 | NOTE | |
| r-devel-linux-x86_64-fedora-clang | 1.42.2 | 25.00 | 245.18 | 270.18 | NOTE | |
| r-devel-linux-x86_64-fedora-gcc | 1.42.2 | 11.00 | 104.91 | 115.91 | NOTE | |
| r-devel-windows-x86_64 | 1.42.2 | 19.00 | 173.00 | 192.00 | NOTE | |
| r-patched-linux-x86_64 | 1.42.2 | 15.69 | 144.64 | 160.33 | NOTE | |
| r-release-linux-x86_64 | 1.42.2 | 14.04 | 144.18 | 158.22 | NOTE | |
| r-release-macos-arm64 | 1.42.2 | 4.00 | 33.00 | 37.00 | NOTE | |
| r-release-macos-x86_64 | 1.42.2 | 11.00 | 112.00 | 123.00 | ERROR | |
| r-release-windows-x86_64 | 1.42.2 | 18.00 | 177.00 | 195.00 | NOTE | |
| r-oldrel-macos-arm64 | 1.42.2 | ERROR | ||||
| r-oldrel-macos-x86_64 | 1.42.2 | 9.00 | 83.00 | 92.00 | ERROR | |
| r-oldrel-windows-x86_64 | 1.42.2 | 27.00 | 217.00 | 244.00 | NOTE |
Version: 1.42.2
Check: Rd files
Result: NOTE
checkRd: (-1) dkprofile.Rd:64: Lost braces
64 | \doi{10.3389/fphys.2017.00524}{Thiery et al. (2017)}
| ^
checkRd: (-1) dne.Rd:45: Lost braces
45 | \doi{10.1002/ajpa.21489}{Bunn et al. (2011)}
| ^
checkRd: (-1) dne.Rd:47: Lost braces
47 | \doi{10.1007/s10914-016-9326-0}{Pampush et al. (2016)}
| ^
checkRd: (-1) inclin.Rd:28: Lost braces
28 | \doi{10.1371/journal.pone.0066142}{Guy et al. (2013)}
| ^
checkRd: (-1) oedist.Rd:43: Lost braces
43 | \doi{10.1371/journal.pone.0066142}{Guy et al. (2013)}
| ^
checkRd: (-1) oedist.Rd:45: Lost braces
45 | \doi{10.1371/journal.pone.0138802}{Guy et al. (2015)}
| ^
checkRd: (-1) oedist.Rd:47: Lost braces
47 | \doi{10.3389/fphys.2017.00524}{Thiery et al. (2017)}
| ^
checkRd: (-1) oedist.Rd:49: Lost braces
49 | \doi{10.1098/rsbl.2019.0671}{Schwartz et al. (2020)}
| ^
checkRd: (-1) opc.Rd:36: Lost braces
36 | \doi{10.1038/nature05433}{Evans et al. (2007)}
| ^
checkRd: (-1) opcr.Rd:30: Lost braces
30 | \doi{10.1038/nature10880}{Wilson et al. (2012)}
| ^
checkRd: (-1) rfi.Rd:34: Lost braces
34 | \doi{10.1016/j.jhevol.2008.08.002}{Boyer (2008)}
| ^
checkRd: (-1) rfi.Rd:35: Lost braces
35 | \doi{10.1371/journal.pone.0066142}{Guy et al. (2013)}
| ^
checkRd: (-1) rrate.Rd:34: Lost braces
34 | \doi{10.1002/ajpa.23916}{Thiery et al. (2019)}
| ^
checkRd: (-1) shape.index.Rd:44: Lost braces
44 | \doi{10.1029/TR013i001p00350}{Horton (1932)}
| ^
checkRd: (-1) shape.index.Rd:46: Lost braces
46 | \doi{10.1130/0016-7606(1956)67[597:EODSAS]2.0.CO;2}{Schumm (1956)}
| ^
checkRd: (-1) shape.index.Rd:48: Lost braces
48 | \doi{10.2475/ajs.255.2.138}{Chorley et al. (1957)}
| ^
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-windows-x86_64, r-patched-linux-x86_64, r-release-linux-x86_64, r-release-macos-arm64, r-release-macos-x86_64, r-release-windows-x86_64, r-oldrel-macos-arm64, r-oldrel-macos-x86_64, r-oldrel-windows-x86_64
Version: 1.42.2
Check: for new files in some other directories
Result: NOTE
Found the following files/directories:
‘~/tmp/scratch/Rtmp0RF5AY’ ‘~/tmp/scratch/Rtmp1MOmrh’
‘~/tmp/scratch/Rtmp1ZC3qh’ ‘~/tmp/scratch/Rtmp1kbkGt’
‘~/tmp/scratch/Rtmp1qP1xs’ ‘~/tmp/scratch/Rtmp2MXOzq’
‘~/tmp/scratch/Rtmp2gsFKA’ ‘~/tmp/scratch/Rtmp2hqOB2’
‘~/tmp/scratch/Rtmp2uqPAb’ ‘~/tmp/scratch/Rtmp3Ov4zB’
‘~/tmp/scratch/Rtmp3SILM8’ ‘~/tmp/scratch/Rtmp45mV9a’
‘~/tmp/scratch/Rtmp4AZhiJ’ ‘~/tmp/scratch/Rtmp4eZGx5’
‘~/tmp/scratch/Rtmp4kQvo8’ ‘~/tmp/scratch/Rtmp5cFjov’
‘~/tmp/scratch/Rtmp6MftSp’ ‘~/tmp/scratch/Rtmp6a9k8Z’
‘~/tmp/scratch/Rtmp6e16L9’ ‘~/tmp/scratch/Rtmp6jnyvN’
‘~/tmp/scratch/Rtmp6vgTmZ’ ‘~/tmp/scratch/Rtmp6zFuQA’
‘~/tmp/scratch/Rtmp8Ma9T9’ ‘~/tmp/scratch/Rtmp8Yiawa’
‘~/tmp/scratch/Rtmp8i2Epi’ ‘~/tmp/scratch/Rtmp9GzFls’
‘~/tmp/scratch/Rtmp9MZ5lt’ ‘~/tmp/scratch/Rtmp9nf6U2’
‘~/tmp/scratch/Rtmp9uQSFV’ ‘~/tmp/scratch/Rtmp9zGRcF’
‘~/tmp/scratch/RtmpASjtqF’ ‘~/tmp/scratch/RtmpAVfKys’
‘~/tmp/scratch/RtmpAXUoij’ ‘~/tmp/scratch/RtmpBM1y8j’
‘~/tmp/scratch/RtmpBY2p5G’ ‘~/tmp/scratch/RtmpBp2F0f’
‘~/tmp/scratch/RtmpBs8Kqq’ ‘~/tmp/scratch/RtmpCXUj0Z’
‘~/tmp/scratch/RtmpCcFUDn’ ‘~/tmp/scratch/RtmpCrc5To’
‘~/tmp/scratch/RtmpD15C5m’ ‘~/tmp/scratch/RtmpDPOCW6’
‘~/tmp/scratch/RtmpEhwzTp’ ‘~/tmp/scratch/RtmpEnFcme’
‘~/tmp/scratch/RtmpF4nvVb’ ‘~/tmp/scratch/RtmpFOodXk’
‘~/tmp/scratch/RtmpFPtv2P’ ‘~/tmp/scratch/RtmpFY0R7N’
‘~/tmp/scratch/RtmpFuia5l’ ‘~/tmp/scratch/RtmpG5mtUv’
‘~/tmp/scratch/RtmpGFmGa6’ ‘~/tmp/scratch/RtmpGanLp6’
‘~/tmp/scratch/RtmpH3nFFs’ ‘~/tmp/scratch/RtmpJooPbS’
‘~/tmp/scratch/RtmpJor03y’ ‘~/tmp/scratch/RtmpJyIa0z’
‘~/tmp/scratch/RtmpJyiEHx’ ‘~/tmp/scratch/RtmpKGtJ9i’
‘~/tmp/scratch/RtmpKcnEfA’ ‘~/tmp/scratch/RtmpMHn3LJ’
‘~/tmp/scratch/RtmpMKLLhq’ ‘~/tmp/scratch/RtmpMNv0d3’
‘~/tmp/scratch/RtmpMu6l7y’ ‘~/tmp/scratch/RtmpNPZEbg’
‘~/tmp/scratch/RtmpNlHSZ0’ ‘~/tmp/scratch/RtmpObvAAC’
‘~/tmp/scratch/RtmpOgwGZZ’ ‘~/tmp/scratch/RtmpOljHHM’
‘~/tmp/scratch/RtmpPAxYaI’ ‘~/tmp/scratch/RtmpPg0PH5’
‘~/tmp/scratch/RtmpQCnyBJ’ ‘~/tmp/scratch/RtmpQKUG5j’
‘~/tmp/scratch/RtmpQKraFu’ ‘~/tmp/scratch/RtmpQU2p7D’
‘~/tmp/scratch/RtmpRLpWfY’ ‘~/tmp/scratch/RtmpRlBpFj’
‘~/tmp/scratch/RtmpS1zuwg’ ‘~/tmp/scratch/RtmpStgccv’
‘~/tmp/scratch/RtmpSyxkW8’ ‘~/tmp/scratch/RtmpT2PZuM’
‘~/tmp/scratch/RtmpTSzx0Z’ ‘~/tmp/scratch/RtmpU0hVIE’
‘~/tmp/scratch/RtmpU2pEVr’ ‘~/tmp/scratch/RtmpUVQ4qs’
‘~/tmp/scratch/RtmpUqXO7Y’ ‘~/tmp/scratch/RtmpUzqDlB’
‘~/tmp/scratch/RtmpWY73im’ ‘~/tmp/scratch/RtmpWoULJa’
‘~/tmp/scratch/RtmpXApEry’ ‘~/tmp/scratch/RtmpXXszqw’
‘~/tmp/scratch/RtmpXpVdRq’ ‘~/tmp/scratch/RtmpYfbZ0t’
‘~/tmp/scratch/RtmpYp2x6y’ ‘~/tmp/scratch/RtmpYrBGm2’
‘~/tmp/scratch/RtmpZSPzcE’ ‘~/tmp/scratch/RtmpZXKPDJ’
‘~/tmp/scratch/RtmpZlrlua’ ‘~/tmp/scratch/RtmpZvl3sk’
‘~/tmp/scratch/RtmpaDRUwF’ ‘~/tmp/scratch/RtmpbWcygK’
‘~/tmp/scratch/Rtmpba8EY9’ ‘~/tmp/scratch/RtmpbkxfIx’
‘~/tmp/scratch/RtmpcSnjjU’ ‘~/tmp/scratch/Rtmpd5HxKi’
‘~/tmp/scratch/RtmpdJzZnL’ ‘~/tmp/scratch/RtmpdqspzH’
‘~/tmp/scratch/RtmpfoCfLf’ ‘~/tmp/scratch/RtmpfuALG6’
‘~/tmp/scratch/RtmpfyRRkB’ ‘~/tmp/scratch/Rtmpg54KJw’
‘~/tmp/scratch/Rtmpg5cOhZ’ ‘~/tmp/scratch/Rtmpg8Id6m’
‘~/tmp/scratch/RtmpgQFWg4’ ‘~/tmp/scratch/RtmpgrQw1z’
‘~/tmp/scratch/RtmphyJjLa’ ‘~/tmp/scratch/Rtmpi4G4Kn’
‘~/tmp/scratch/Rtmpiej9wF’ ‘~/tmp/scratch/RtmpjCkNZm’
‘~/tmp/scratch/RtmpkKaCbN’ ‘~/tmp/scratch/Rtmpky7acG’
‘~/tmp/scratch/RtmplGMHlt’ ‘~/tmp/scratch/RtmplpvZt2’
‘~/tmp/scratch/Rtmplrk2sY’ ‘~/tmp/scratch/RtmpmRJVjx’
‘~/tmp/scratch/Rtmpmgg32U’ ‘~/tmp/scratch/Rtmpms1joY’
‘~/tmp/scratch/Rtmpn44mNx’ ‘~/tmp/scratch/RtmpoCnX5P’
‘~/tmp/scratch/Rtmpocq3Ey’ ‘~/tmp/scratch/RtmponKXfG’
‘~/tmp/scratch/RtmposooXT’ ‘~/tmp/scratch/RtmppPgUfk’
‘~/tmp/scratch/RtmppXgaNp’ ‘~/tmp/scratch/RtmpqLwD5M’
‘~/tmp/scratch/RtmpqmSpBQ’ ‘~/tmp/scratch/RtmpqycR45’
‘~/tmp/scratch/Rtmps6a1Yd’ ‘~/tmp/scratch/RtmpsY0lTp’
‘~/tmp/scratch/Rtmpsa0dFT’ ‘~/tmp/scratch/RtmpshXw2v’
‘~/tmp/scratch/RtmpsjpwLd’ ‘~/tmp/scratch/RtmpsmktMu’
‘~/tmp/scratch/RtmpsuwwmQ’ ‘~/tmp/scratch/RtmptPW0G9’
‘~/tmp/scratch/RtmptQUEPd’ ‘~/tmp/scratch/RtmptXtflm’
‘~/tmp/scratch/RtmptgPfX0’ ‘~/tmp/scratch/RtmpthzFkw’
‘~/tmp/scratch/RtmpuJNVBn’ ‘~/tmp/scratch/Rtmpw84Zgt’
‘~/tmp/scratch/RtmpwZuPZN’ ‘~/tmp/scratch/RtmpwhCCMw’
‘~/tmp/scratch/RtmpwhfqSg’ ‘~/tmp/scratch/Rtmpx5uquh’
‘~/tmp/scratch/RtmpxAm0Ey’ ‘~/tmp/scratch/Rtmpz5f6YJ’
‘~/tmp/scratch/ccOhHfZk.s’
‘~/tmp/scratch/quarto-sessionf557b0c85c285745’
‘~/tmp/scratch/xvfb-run.0d3e4W’ ‘~/tmp/scratch/xvfb-run.0rJmEn’
‘~/tmp/scratch/xvfb-run.1f98nH’ ‘~/tmp/scratch/xvfb-run.32X6Jg’
‘~/tmp/scratch/xvfb-run.4TrsD3’ ‘~/tmp/scratch/xvfb-run.4vJu1Z’
‘~/tmp/scratch/xvfb-run.5nSXBg’ ‘~/tmp/scratch/xvfb-run.8umTEN’
‘~/tmp/scratch/xvfb-run.AOkl8W’ ‘~/tmp/scratch/xvfb-run.Aqbd55’
‘~/tmp/scratch/xvfb-run.Bu8jKZ’ ‘~/tmp/scratch/xvfb-run.C0disX’
‘~/tmp/scratch/xvfb-run.FWtQSA’ ‘~/tmp/scratch/xvfb-run.FubmAX’
‘~/tmp/scratch/xvfb-run.Hh9IpC’ ‘~/tmp/scratch/xvfb-run.IXus3w’
‘~/tmp/scratch/xvfb-run.IcsHdb’ ‘~/tmp/scratch/xvfb-run.IrjzrS’
‘~/tmp/scratch/xvfb-run.J4FpId’ ‘~/tmp/scratch/xvfb-run.JskTl0’
‘~/tmp/scratch/xvfb-run.KgO7rW’ ‘~/tmp/scratch/xvfb-run.KvSdHH’
‘~/tmp/scratch/xvfb-run.LWDZ8o’ ‘~/tmp/scratch/xvfb-run.Lia04E’
‘~/tmp/scratch/xvfb-run.NAqmbh’ ‘~/tmp/scratch/xvfb-run.Oh3jnr’
‘~/tmp/scratch/xvfb-run.OmwDLe’ ‘~/tmp/scratch/xvfb-run.POr63S’
‘~/tmp/scratch/xvfb-run.QkXm0k’ ‘~/tmp/scratch/xvfb-run.SJJeUW’
‘~/tmp/scratch/xvfb-run.Vl03MJ’ ‘~/tmp/scratch/xvfb-run.Vtuqpk’
‘~/tmp/scratch/xvfb-run.VvgnAa’ ‘~/tmp/scratch/xvfb-run.WMUwum’
‘~/tmp/scratch/xvfb-run.Y2WLRZ’ ‘~/tmp/scratch/xvfb-run.Y9YpU5’
‘~/tmp/scratch/xvfb-run.YFpfCc’ ‘~/tmp/scratch/xvfb-run.YeDRt2’
‘~/tmp/scratch/xvfb-run.ZMgLMl’ ‘~/tmp/scratch/xvfb-run.a2JMCd’
‘~/tmp/scratch/xvfb-run.atWLGs’ ‘~/tmp/scratch/xvfb-run.b6zMbw’
‘~/tmp/scratch/xvfb-run.bQA0qN’ ‘~/tmp/scratch/xvfb-run.hVoAzK’
‘~/tmp/scratch/xvfb-run.ivA6e4’ ‘~/tmp/scratch/xvfb-run.k6zwYy’
‘~/tmp/scratch/xvfb-run.kXa5fX’ ‘~/tmp/scratch/xvfb-run.l1nziU’
‘~/tmp/scratch/xvfb-run.lxyCH2’ ‘~/tmp/scratch/xvfb-run.nhlXs6’
‘~/tmp/scratch/xvfb-run.qnD56n’ ‘~/tmp/scratch/xvfb-run.r6uabG’
‘~/tmp/scratch/xvfb-run.rbhI0z’ ‘~/tmp/scratch/xvfb-run.rq3dye’
‘~/tmp/scratch/xvfb-run.rqjSVb’ ‘~/tmp/scratch/xvfb-run.sB8FIF’
‘~/tmp/scratch/xvfb-run.sTkgR5’ ‘~/tmp/scratch/xvfb-run.sXzTl4’
‘~/tmp/scratch/xvfb-run.ulPZjt’ ‘~/tmp/scratch/xvfb-run.vw5Z5f’
‘~/tmp/scratch/xvfb-run.w1Ak6u’ ‘~/tmp/scratch/xvfb-run.wCh1Jd’
‘~/tmp/scratch/xvfb-run.x42v25’ ‘~/tmp/scratch/xvfb-run.yLtcGo’
‘~/tmp/scratch/xvfb-run.yjXofh’ ‘~/tmp/scratch/xvfb-run.zzyHTo’
‘/dev/shm/sm_segment.gimli1.1001.b4580000.0’
‘~/.cache/pocl/uncached/tempfile_bVfr9B’
Flavor: r-devel-linux-x86_64-debian-gcc
Version: 1.42.2
Check: examples
Result: ERROR
Running examples in ‘doolkit-Ex.R’ failed
The error most likely occurred in:
> ### Name: dkcrop
> ### Title: crop a mesh
> ### Aliases: dkcrop
>
> ### ** Examples
>
> #Crop above a certain threshold:
> mythreshold <- quantile(elev(dkmodel$basin), 0.5)
> mypolynetwork <- poly.network(dkmodel$basin, elev(dkmodel$basin),
+ lwr.limit = mythreshold)
> mynewmesh <- dkcrop(dkmodel$basin, mypolynetwork)
> dkmap(mynewmesh, elev(mynewmesh))
>
> #Crop the sharpest dental elements:
> sharpmesh <- dkcrop(dkmodel$basin, poly.network(dkmodel$basin,
+ Rvcg::vcgCurve(dkmodel$basin)$meanitmax,
+ lwr.limit = quantile(Rvcg::vcgCurve(dkmodel$basin)$meanitmax, 0.8),
+ min.size = 50))
> dkmap(sharpmesh, arc(sharpmesh), col = "arc", col.levels = 20,
+ min.range = -20, max.range = 20)
> #Map of the sharpest elements' elevation, slope and orientation;
> dkmap(sharpmesh, elev(sharpmesh), col = "elev")
Flavor: r-release-macos-x86_64
Version: 1.42.2
Check: examples
Result: ERROR
Running examples in ‘doolkit-Ex.R’ failed
The error most likely occurred in:
> ### Name: dkcrop
> ### Title: crop a mesh
> ### Aliases: dkcrop
>
> ### ** Examples
>
> #Crop above a certain threshold:
> mythreshold <- quantile(elev(dkmodel$basin), 0.5)
> mypolynetwork <- poly.network(dkmodel$basin, elev(dkmodel$basin),
+ lwr.limit = mythreshold)
> mynewmesh <- dkcrop(dkmodel$basin, mypolynetwork)
> dkmap(mynewmesh, elev(mynewmesh))
Flavors: r-oldrel-macos-arm64, r-oldrel-macos-x86_64