Last updated on 2026-07-13 16:52:25 CEST.
| Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
|---|---|---|---|---|---|---|
| r-devel-linux-x86_64-debian-clang | 0.1.2 | 34.91 | 316.54 | 351.45 | OK | |
| r-devel-linux-x86_64-debian-gcc | 0.1.2 | 22.97 | 216.23 | 239.20 | NOTE | |
| r-devel-linux-x86_64-fedora-clang | 0.1.2 | 61.00 | 509.25 | 570.25 | ERROR | |
| r-devel-linux-x86_64-fedora-gcc | 0.1.2 | 60.00 | 569.36 | 629.36 | OK | |
| r-devel-windows-x86_64 | 0.1.2 | 33.00 | 265.00 | 298.00 | OK | |
| r-patched-linux-x86_64 | 0.1.2 | 32.09 | 306.90 | 338.99 | OK | |
| r-release-linux-x86_64 | 0.1.2 | 30.81 | 310.05 | 340.86 | OK | |
| r-release-macos-arm64 | 0.1.2 | 8.00 | 77.00 | 85.00 | OK | |
| r-release-macos-x86_64 | 0.1.2 | 25.00 | 337.00 | 362.00 | OK | |
| r-release-windows-x86_64 | 0.1.2 | 36.00 | 269.00 | 305.00 | OK | |
| r-oldrel-macos-arm64 | 0.1.2 | 8.00 | 112.00 | 120.00 | OK | |
| r-oldrel-macos-x86_64 | 0.1.2 | 24.00 | 347.00 | 371.00 | OK | |
| r-oldrel-windows-x86_64 | 0.1.2 | 51.00 | 377.00 | 428.00 | OK |
Version: 0.1.2
Check: Rd contents
Result: NOTE
Rd files without \usage:
‘st_area.Rd’ ‘st_as_text.Rd’ ‘st_buffer.Rd’ ‘st_centroid.Rd’
‘st_length.Rd’ ‘st_perimeter.Rd’ ‘st_simplify.Rd’
\arguments should not be documented without \usage.
Flavor: r-devel-linux-x86_64-debian-gcc
Version: 0.1.2
Check: re-building of vignette outputs
Result: ERROR
Error(s) in re-building vignettes:
--- re-building ‘class_structure.Rmd’ using rmarkdown
Quitting from class_structure.Rmd:34-54 [unnamed-chunk-2]
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
<error/rlang_error>
Error in `duckdb_result()`:
! Invalid Error: Invalid Input Error: Initialization function "spatial_duckdb_cpp_init" from file "/tmp/RtmpDIdO7F/working_dir/Rtmp8bIsll/dbSpatial-duckdb-extensions/v1.5.4/linux_amd64/spatial.duckdb_extension" threw an exception: "Missing DB manager"
ℹ Context: rapi_execute
ℹ Error type: INVALID
---
Backtrace:
▆
1. └─dbSpatial::dbSpatial(...)
2. ├─base::suppressMessages(loadSpatial(conn = conn))
3. │ └─base::withCallingHandlers(...)
4. └─dbSpatial::loadSpatial(conn = conn)
5. ├─DBI::dbExecute(conn, "LOAD spatial")
6. └─DBI::dbExecute(conn, "LOAD spatial")
7. ├─DBI::dbSendStatement(conn, statement, ...)
8. └─DBI::dbSendStatement(conn, statement, ...)
9. ├─DBI::dbSendQuery(conn, statement, ...)
10. └─duckdb::dbSendQuery(conn, statement, ...)
11. └─duckdb (local) .local(conn, statement, ...)
12. └─duckdb:::duckdb_result(connection = conn, stmt_lst = stmt_lst, arrow = arrow)
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
Error: processing vignette 'class_structure.Rmd' failed with diagnostics:
Invalid Error: Invalid Input Error: Initialization function "spatial_duckdb_cpp_init" from file "/tmp/RtmpDIdO7F/working_dir/Rtmp8bIsll/dbSpatial-duckdb-extensions/v1.5.4/linux_amd64/spatial.duckdb_extension" threw an exception: "Missing DB manager"
ℹ Context: rapi_execute
ℹ Error type: INVALID
--- failed re-building ‘class_structure.Rmd’
--- re-building ‘getting_started.Rmd’ using rmarkdown
Quitting from getting_started.Rmd:42-55 [unnamed-chunk-3]
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
<error/rlang_error>
Error in `duckdb_result()`:
! Invalid Error: Invalid Input Error: Initialization function "spatial_duckdb_cpp_init" from file "/tmp/RtmpDIdO7F/working_dir/RtmpIG44jO/dbSpatial-duckdb-extensions/v1.5.4/linux_amd64/spatial.duckdb_extension" threw an exception: "Missing DB manager"
ℹ Context: rapi_execute
ℹ Error type: INVALID
---
Backtrace:
▆
1. └─dbSpatial::dbSpatial(...)
2. ├─base::suppressMessages(loadSpatial(conn = conn))
3. │ └─base::withCallingHandlers(...)
4. └─dbSpatial::loadSpatial(conn = conn)
5. ├─DBI::dbExecute(conn, "LOAD spatial")
6. └─DBI::dbExecute(conn, "LOAD spatial")
7. ├─DBI::dbSendStatement(conn, statement, ...)
8. └─DBI::dbSendStatement(conn, statement, ...)
9. ├─DBI::dbSendQuery(conn, statement, ...)
10. └─duckdb::dbSendQuery(conn, statement, ...)
11. └─duckdb (local) .local(conn, statement, ...)
12. └─duckdb:::duckdb_result(connection = conn, stmt_lst = stmt_lst, arrow = arrow)
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
Error: processing vignette 'getting_started.Rmd' failed with diagnostics:
Invalid Error: Invalid Input Error: Initialization function "spatial_duckdb_cpp_init" from file "/tmp/RtmpDIdO7F/working_dir/RtmpIG44jO/dbSpatial-duckdb-extensions/v1.5.4/linux_amd64/spatial.duckdb_extension" threw an exception: "Missing DB manager"
ℹ Context: rapi_execute
ℹ Error type: INVALID
--- failed re-building ‘getting_started.Rmd’
--- re-building ‘spatial_operations.Rmd’ using rmarkdown
[gannet:2025410:0:2025410] Caught signal 11 (Segmentation fault: address not mapped to object at address 0x449)
==== backtrace (tid:2025410) ====
0 /lib64/libucs.so.0(ucs_handle_error+0x2e4) [0x7f58921e4df4]
1 /lib64/libucs.so.0(+0x17aed) [0x7f58921e6aed]
2 /lib64/libucs.so.0(+0x17cbd) [0x7f58921e6cbd]
3 /lib64/libc.so.6(+0x1a040) [0x7f58aba29040]
4 /tmp/RtmpDIdO7F/working_dir/RtmpEhJBWY/dbSpatial-duckdb-extensions/v1.5.4/linux_amd64/spatial.duckdb_extension(+0x1196b50) [0x7f57b4ccbb50]
5 /tmp/RtmpDIdO7F/working_dir/RtmpEhJBWY/dbSpatial-duckdb-extensions/v1.5.4/linux_amd64/spatial.duckdb_extension(+0x1168728) [0x7f57b4c9d728]
6 /tmp/RtmpDIdO7F/working_dir/RtmpEhJBWY/dbSpatial-duckdb-extensions/v1.5.4/linux_amd64/spatial.duckdb_extension(+0x773544) [0x7f57b42a8544]
7 /tmp/RtmpDIdO7F/working_dir/RtmpEhJBWY/dbSpatial-duckdb-extensions/v1.5.4/linux_amd64/spatial.duckdb_extension(+0x7718d9) [0x7f57b42a68d9]
8 /data/gannet/ripley/R/test-clang/duckdb/libs/duckdb.so(_ZN6duckdb15ExtensionHelper29LoadExternalExtensionInternalERNS_16DatabaseInstanceERNS_10FileSystemERKNSt3__112basic_stringIcNS5_11char_traitsIcEENS5_9allocatorIcEEEERNS_19ExtensionActiveLoadE+0x18f) [0x7f5896a7f85f]
9 /data/gannet/ripley/R/test-clang/duckdb/libs/duckdb.so(_ZN6duckdb15ExtensionHelper21LoadExternalExtensionERNS_16DatabaseInstanceERNS_10FileSystemERKNSt3__112basic_stringIcNS5_11char_traitsIcEENS5_9allocatorIcEEEE+0x4a) [0x7f5896a7f60a]
10 /data/gannet/ripley/R/test-clang/duckdb/libs/duckdb.so(_ZNK6duckdb12PhysicalLoad15GetDataInternalERNS_16ExecutionContextERNS_9DataChunkERNS_19OperatorSourceInputE+0x151) [0x7f589786d401]
11 /data/gannet/ripley/R/test-clang/duckdb/libs/duckdb.so(_ZN6duckdb16PipelineExecutor15FetchFromSourceERNS_9DataChunkE+0x98) [0x7f58980a10c8]
12 /data/gannet/ripley/R/test-clang/duckdb/libs/duckdb.so(_ZN6duckdb16PipelineExecutor7ExecuteEm+0x146) [0x7f589809dca6]
13 /data/gannet/ripley/R/test-clang/duckdb/libs/duckdb.so(_ZN6duckdb12PipelineTask11ExecuteTaskENS_17TaskExecutionModeE+0x112) [0x7f589809d8d2]
14 /data/gannet/ripley/R/test-clang/duckdb/libs/duckdb.so(_ZN6duckdb12ExecutorTask7ExecuteENS_17TaskExecutionModeE+0xa0) [0x7f5898097570]
15 /data/gannet/ripley/R/test-clang/duckdb/libs/duckdb.so(_ZN6duckdb8Executor11ExecuteTaskEb+0x1c0) [0x7f589809c8d0]
16 /data/gannet/ripley/R/test-clang/duckdb/libs/duckdb.so(_ZN6duckdb13ClientContext19ExecuteTaskInternalERNS_17ClientContextLockERNS_15BaseQueryResultEb+0x40) [0x7f5897ea8c60]
17 /data/gannet/ripley/R/test-clang/duckdb/libs/duckdb.so(_ZN6duckdb18PendingQueryResult15ExecuteInternalERNS_17ClientContextLockE+0x7a) [0x7f5897eab3ba]
18 /data/gannet/ripley/R/test-clang/duckdb/libs/duckdb.so(_ZN6duckdb13ClientContext7ExecuteERKNSt3__112basic_stringIcNS1_11char_traitsIcEENS1_9allocatorIcEEEERNS_10shared_ptrINS_21PreparedStatementDataELb1EEERKNS_22PendingQueryParametersE+0xa0) [0x7f5897eab100]
19 /data/gannet/ripley/R/test-clang/duckdb/libs/duckdb.so(_ZN6duckdb17PreparedStatement7ExecuteERNSt3__113unordered_mapINS1_12basic_stringIcNS1_11char_traitsIcEENS1_9allocatorIcEEEENS_18BoundParameterDataENS_33CaseInsensitiveStringHashFunctionENS_29CaseInsensitiveStringEqualityENS6_INS1_4pairIKS8_S9_EEEEEEb+0x1c3) [0x7f5897ece3a3]
20 /data/gannet/ripley/R/test-clang/duckdb/libs/duckdb.so(_ZN6duckdb17PreparedStatement7ExecuteERNS_6vectorINS_5ValueELb1ENSt3__19allocatorIS2_EEEEb+0x172) [0x7f5897ece642]
21 /data/gannet/ripley/R/test-clang/duckdb/libs/duckdb.so(+0x1087fc) [0x7f58967087fc]
22 /data/gannet/ripley/R/test-clang/duckdb/libs/duckdb.so(_duckdb_rapi_execute+0x63) [0x7f5896772f73]
23 /data/gannet/ripley/R/R-clang/bin/exec/R(+0x8f5b4) [0x55cb95b4b5b4]
24 /data/gannet/ripley/R/R-clang/bin/exec/R(+0xdae98) [0x55cb95b96e98]
25 /data/gannet/ripley/R/R-clang/bin/exec/R(+0xc921c) [0x55cb95b8521c]
26 /data/gannet/ripley/R/R-clang/bin/exec/R(Rf_eval+0x1a5) [0x55cb95b849d5]
27 /data/gannet/ripley/R/R-clang/bin/exec/R(+0xc9474) [0x55cb95b85474]
28 /data/gannet/ripley/R/R-clang/bin/exec/R(Rf_eval+0x26e) [0x55cb95b84a9e]
29 /data/gannet/ripley/R/R-clang/bin/exec/R(+0xc9474) [0x55cb95b85474]
30 /data/gannet/ripley/R/R-clang/bin/exec/R(+0xdcfa0) [0x55cb95b98fa0]
31 /data/gannet/ripley/R/R-clang/bin/exec/R(+0xcd659) [0x55cb95b89659]
32 /data/gannet/ripley/R/R-clang/bin/exec/R(+0xc921c) [0x55cb95b8521c]
33 /data/gannet/ripley/R/R-clang/bin/exec/R(Rf_eval+0x1a5) [0x55cb95b849d5]
34 /data/gannet/ripley/R/R-clang/bin/exec/R(+0xe0b39) [0x55cb95b9cb39]
35 /data/gannet/ripley/R/R-clang/bin/exec/R(+0xe002b) [0x55cb95b9c02b]
36 /data/gannet/ripley/R/R-clang/bin/exec/R(+0xc98f7) [0x55cb95b858f7]
37 /data/gannet/ripley/R/R-clang/bin/exec/R(Rf_eval+0x5f8) [0x55cb95b84e28]
38 /data/gannet/ripley/R/R-clang/bin/exec/R(+0xc9474) [0x55cb95b85474]
39 /data/gannet/ripley/R/R-clang/bin/exec/R(+0xdcfa0) [0x55cb95b98fa0]
40 /data/gannet/ripley/R/R-clang/bin/exec/R(+0xcd659) [0x55cb95b89659]
41 /data/gannet/ripley/R/R-clang/bin/exec/R(+0xc921c) [0x55cb95b8521c]
42 /data/gannet/ripley/R/R-clang/bin/exec/R(Rf_eval+0x1a5) [0x55cb95b849d5]
43 /data/gannet/ripley/R/R-clang/bin/exec/R(+0xe0b39) [0x55cb95b9cb39]
44 /data/gannet/ripley/R/R-clang/bin/exec/R(+0xe002b) [0x55cb95b9c02b]
45 /data/gannet/ripley/R/R-clang/bin/exec/R(+0xc98f7) [0x55cb95b858f7]
46 /data/gannet/ripley/R/R-clang/bin/exec/R(Rf_eval+0x5f8) [0x55cb95b84e28]
47 /data/gannet/ripley/R/test-clang/rlang/libs/rlang.so(+0x4993) [0x7f58a8e34993]
48 /data/gannet/ripley/R/R-clang/bin/exec/R(+0x8d703) [0x55cb95b49703]
49 /data/gannet/ripley/R/R-clang/bin/exec/R(+0xcfc54) [0x55cb95b8bc54]
50 /data/gannet/ripley/R/R-clang/bin/exec/R(+0xc921c) [0x55cb95b8521c]
51 /data/gannet/ripley/R/R-clang/bin/exec/R(Rf_eval+0x1a5) [0x55cb95b849d5]
52 /data/gannet/ripley/R/R-clang/bin/exec/R(+0xe0b39) [0x55cb95b9cb39]
53 /data/gannet/ripley/R/R-clang/bin/exec/R(+0xe002b) [0x55cb95b9c02b]
54 /data/gannet/ripley/R/R-clang/bin/exec/R(+0xc98f7) [0x55cb95b858f7]
55 /data/gannet/ripley/R/R-clang/bin/exec/R(Rf_eval+0x5f8) [0x55cb95b84e28]
56 /data/gannet/ripley/R/R-clang/bin/exec/R(+0xe5e98) [0x55cb95ba1e98]
57 /data/gannet/ripley/R/R-clang/bin/exec/R(Rf_eval+0x3d0) [0x55cb95b84c00]
58 /data/gannet/ripley/R/R-clang/bin/exec/R(+0xe518b) [0x55cb95ba118b]
59 /data/gannet/ripley/R/R-clang/bin/exec/R(Rf_eval+0x3d0) [0x55cb95b84c00]
60 /data/gannet/ripley/R/R-clang/bin/exec/R(+0xe0b39) [0x55cb95b9cb39]
61 /data/gannet/ripley/R/R-clang/bin/exec/R(+0xe002b) [0x55cb95b9c02b]
=================================
*** caught segfault ***
address 0x4d2001ee7c2, cause 'unknown'
Traceback:
1: rapi_execute(stmt, convert_opts)
2: withCallingHandlers(expr, condition = function(cnd) { { .__handler_frame__. <- TRUE .__setup_frame__. <- frame if (inherits(cnd, "message")) { except <- c("warning", "error") } else if (inherits(cnd, "warning")) { except <- "error" } else { except <- "" } } while (!is_null(cnd)) { if (inherits(cnd, "error")) { out <- handlers[[1L]](cnd) if (!inherits(out, "rlang_zap")) throw(out) } inherit <- .subset2(.subset2(cnd, "rlang"), "inherit") if (is_false(inherit)) { return() } cnd <- .subset2(cnd, "parent") }})
3: doTryCatch(return(expr), name, parentenv, handler)
4: tryCatchOne(expr, names, parentenv, handlers[[1L]])
5: tryCatchList(expr, classes, parentenv, handlers)
6: tryCatch(withCallingHandlers(expr, condition = function(cnd) { { .__handler_frame__. <- TRUE .__setup_frame__. <- frame if (inherits(cnd, "message")) { except <- c("warning", "error") } else if (inherits(cnd, "warning")) { except <- "error" } else { except <- "" } } while (!is_null(cnd)) { if (inherits(cnd, "error")) { out <- handlers[[1L]](cnd) if (!inherits(out, "rlang_zap")) throw(out) } inherit <- .subset2(.subset2(cnd, "rlang"), "inherit") if (is_false(inherit)) { return() } cnd <- .subset2(cnd, "parent") }}), stackOverflowError = handlers[[1L]])
7: rlang::try_fetch(rapi_execute(stmt, convert_opts), error = function(e) { rethrow_error_from_rapi(e, call)})
8: rethrow_rapi_execute(res@stmt_lst$ref, duckdb_convert_opts_impl(res@connection@convert_opts, arrow = res@arrow))
9: duckdb_execute(res)
10: duckdb_result(connection = conn, stmt_lst = stmt_lst, arrow = arrow)
11: .local(conn, statement, ...)
12: dbSendQuery(conn, statement, ...)
13: dbSendQuery(conn, statement, ...)
14: dbSendStatement(conn, statement, ...)
15: dbSendStatement(conn, statement, ...)
16: DBI::dbExecute(conn, "LOAD spatial")
17: DBI::dbExecute(conn, "LOAD spatial")
18: loadSpatial(conn = conn)
19: withCallingHandlers(expr, message = function(c) if (inherits(c, classes)) tryInvokeRestart("muffleMessage"))
20: suppressMessages(loadSpatial(conn = conn))
21: dbSpatial(conn = con, name = "pts", value = df, x_colName = "x", y_colName = "y", overwrite = TRUE)
22: eval(expr, envir)
23: eval(expr, envir)
24: withVisible(eval(expr, envir))
25: withCallingHandlers(code, error = function (e) rlang::entrace(e), message = function (cnd) { watcher$capture_plot_and_output() if (on_message$capture) { watcher$push(cnd) } if (on_message$silence) { invokeRestart("muffleMessage") }}, warning = function (cnd) { if (getOption("warn") >= 2 || getOption("warn") < 0) { return() } watcher$capture_plot_and_output() if (on_warning$capture) { cnd <- sanitize_call(cnd) watcher$push(cnd) } if (on_warning$silence) { invokeRestart("muffleWarning") }}, error = function (cnd) { watcher$capture_plot_and_output() cnd <- sanitize_call(cnd) watcher$push(cnd) switch(on_error, continue = invokeRestart("eval_continue"), stop = invokeRestart("eval_stop"), error = NULL)})
26: eval(call)
27: eval(call)
28: with_handlers({ for (expr in tle$exprs) { ev <- withVisible(eval(expr, envir)) watcher$capture_plot_and_output() watcher$print_value(ev$value, ev$visible, envir) } TRUE}, handlers)
29: doWithOneRestart(return(expr), restart)
30: withOneRestart(expr, restarts[[1L]])
31: withRestartList(expr, restarts[-nr])
32: doWithOneRestart(return(expr), restart)
33: withOneRestart(withRestartList(expr, restarts[-nr]), restarts[[nr]])
34: withRestartList(expr, restarts)
35: withRestarts(with_handlers({ for (expr in tle$exprs) { ev <- withVisible(eval(expr, envir)) watcher$capture_plot_and_output() watcher$print_value(ev$value, ev$visible, envir) } TRUE}, handlers), eval_continue = function() TRUE, eval_stop = function() FALSE)
36: evaluate::evaluate(...)
37: evaluate(code, envir = env, new_device = FALSE, keep_warning = if (is.numeric(options$warning)) TRUE else options$warning, keep_message = if (is.numeric(options$message)) TRUE else options$message, stop_on_error = if (is.numeric(options$error)) options$error else { if (options$error && options$include) 0L else 2L }, output_handler = knit_handlers(options$render, options))
38: in_dir(input_dir(), expr)
39: in_input_dir(evaluate(code, envir = env, new_device = FALSE, keep_warning = if (is.numeric(options$warning)) TRUE else options$warning, keep_message = if (is.numeric(options$message)) TRUE else options$message, stop_on_error = if (is.numeric(options$error)) options$error else { if (options$error && options$include) 0L else 2L }, output_handler = knit_handlers(options$render, options)))
40: eng_r(options)
41: block_exec(params)
42: call_block(x)
43: process_group(group)
44: withCallingHandlers(if (tangle) process_tangle(group) else process_group(group), error = function(e) { if (progress && is.function(pb$interrupt)) pb$interrupt() if (is_R_CMD_build() || is_R_CMD_check()) error <<- format(e) })
45: with_options(withCallingHandlers(if (tangle) process_tangle(group) else process_group(group), error = function(e) { if (progress && is.function(pb$interrupt)) pb$interrupt() if (is_R_CMD_build() || is_R_CMD_check()) error <<- format(e) }), list(rlang_trace_top_env = knit_global()))
46: xfun:::handle_error(with_options(withCallingHandlers(if (tangle) process_tangle(group) else process_group(group), error = function(e) { if (progress && is.function(pb$interrupt)) pb$interrupt() if (is_R_CMD_build() || is_R_CMD_check()) error <<- format(e) }), list(rlang_trace_top_env = knit_global())), function(loc) { setwd(wd) write_utf8(res, output %n% stdout()) paste0("\nQuitting from ", loc, if (!is.null(error)) paste0("\n", rule(), error, "\n", rule()))}, if (labels[i] != "") sprintf(" [%s]", labels[i]), get_loc)
47: process_file(text, output)
48: knitr::knit(knit_input, knit_output, envir = envir, quiet = quiet)
49: rmarkdown::render(file, encoding = encoding, quiet = quiet, envir = globalenv(), output_dir = getwd(), ...)
50: vweave_rmarkdown(...)
51: engine$weave(file, quiet = quiet, encoding = enc)
52: doTryCatch(return(expr), name, parentenv, handler)
53: tryCatchOne(expr, names, parentenv, handlers[[1L]])
54: tryCatchList(expr, classes, parentenv, handlers)
55: tryCatch({ engine$weave(file, quiet = quiet, encoding = enc) setwd(startdir) output <- find_vignette_product(name, by = "weave", engine = engine) if (!have.makefile && vignette_is_tex(output)) { texi2pdf(file = output, clean = FALSE, quiet = quiet) output <- find_vignette_product(name, by = "texi2pdf", engine = engine) }}, error = function(e) { OK <<- FALSE message(gettextf("Error: processing vignette '%s' failed with diagnostics:\n%s", file, conditionMessage(e)), domain = NA)})
56: tools:::.buildOneVignette("spatial_operations.Rmd", "/data/gannet/ripley/R/packages/tests-clang/dbSpatial.Rcheck/vign_test/dbSpatial", TRUE, FALSE, "spatial_operations", "UTF-8", "/tmp/RtmpDIdO7F/working_dir/RtmpWPWB0g/file1ecde720d47bf9.rds")
An irrecoverable exception occurred. R is aborting now ...
SUMMARY: processing the following files failed:
‘class_structure.Rmd’ ‘getting_started.Rmd’ ‘spatial_operations.Rmd’
Error: Vignette re-building failed.
Execution halted
Flavor: r-devel-linux-x86_64-fedora-clang