Last updated on 2026-08-03 09:50:14 CEST.
| Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
|---|---|---|---|---|---|---|
| r-devel-linux-x86_64-debian-clang | 0.2.1 | 9.62 | 67.82 | 77.44 | NOTE | |
| r-devel-linux-x86_64-debian-gcc | 0.2.1 | 7.50 | 51.40 | 58.90 | NOTE | |
| r-devel-linux-x86_64-fedora-clang | 0.2.1 | 15.00 | 100.00 | 115.00 | NOTE | |
| r-devel-linux-x86_64-fedora-gcc | 0.2.1 | 50.58 | NOTE | |||
| r-devel-windows-x86_64 | 0.2.1 | 11.00 | 74.00 | 85.00 | NOTE | |
| r-patched-linux-x86_64 | 0.2.1 | 9.23 | 62.99 | 72.22 | NOTE | |
| r-release-linux-x86_64 | 0.2.1 | 7.99 | 63.07 | 71.06 | NOTE | |
| r-release-macos-arm64 | 0.2.1 | 2.00 | 18.00 | 20.00 | NOTE | |
| r-release-macos-x86_64 | 0.2.1 | 7.00 | 62.00 | 69.00 | NOTE | |
| r-release-windows-x86_64 | 0.2.1 | 11.00 | 75.00 | 86.00 | NOTE | |
| r-oldrel-macos-arm64 | 0.2.1 | NOTE | ||||
| r-oldrel-macos-x86_64 | 0.2.1 | 6.00 | 66.00 | 72.00 | NOTE | |
| r-oldrel-windows-x86_64 | 0.2.1 | 14.00 | 90.00 | 104.00 | NOTE |
Version: 0.2.1
Check: Rd files
Result: NOTE
checkRd: (-1) bwgs.cv.Rd:27: Lost braces; missing escapes or markup?
27 | \item{geno}{Matrix (n x m) of genotypes for the training population: n lines with m markers. Genotypes should be coded {-1, 0, 1}. Missing data are allowed and coded as NA.}
| ^
checkRd: (-1) bwgs.cv.Rd:59: Lost braces; missing escapes or markup?
59 | \item{r2}{Coefficient of linkage disequilibrium (LD). Setting 0<r2<1 if the genotypic reduction method is in {LD or ANO+LD }.}
| ^
checkRd: (-1) bwgs.predict.Rd:25: Lost braces; missing escapes or markup?
25 | \item{geno_train}{Matrix (n x m) of genotypes for the training population: n lines with m markers. Genotypes should be coded as {-1, 0, 1, NA}. Missing data are allowed and coded as NA.}
| ^
checkRd: (-1) bwgs.predict.Rd:29: Lost braces; missing escapes or markup?
29 | \item{geno_target}{Matrix (z x m) of genotypes for the target population: z lines with the same m markers as in geno_train. Genotypes should be coded as {-1, 0, 1, NA}. Missing data are allowed and coded as NA. Other arguments are identical to those of bwgs.cv, except pop_reduct_method, nTimes and nFolds, since the prediction is run only once, using the whole training population for model estimation, then applied to the target population.}
| ^
checkRd: (-1) bwgs.predict.Rd:49: Lost braces; missing escapes or markup?
49 | \item{r2}{Coefficient of linkage disequilibrium (LD). Setting 0<r2<1 if the genotypic reduction method is in {LD or ANO+LD }.}
| ^
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-windows-x86_64, r-patched-linux-x86_64, r-release-linux-x86_64, r-release-macos-arm64, r-release-macos-x86_64, r-release-windows-x86_64, r-oldrel-macos-arm64, r-oldrel-macos-x86_64, r-oldrel-windows-x86_64
Version: 0.2.1
Check: for new files in some other directories
Result: NOTE
Found the following files/directories:
‘~/tmp/scratch/Rtmp0apP4j’ ‘~/tmp/scratch/Rtmp13KVBT’
‘~/tmp/scratch/Rtmp2dMcSx’ ‘~/tmp/scratch/Rtmp3VLITL’
‘~/tmp/scratch/Rtmp3jHbhl’ ‘~/tmp/scratch/Rtmp4ACu26’
‘~/tmp/scratch/Rtmp4LLmx1’ ‘~/tmp/scratch/Rtmp4wuAYR’
‘~/tmp/scratch/Rtmp5WJIXP’ ‘~/tmp/scratch/Rtmp5xoS8r’
‘~/tmp/scratch/Rtmp61hQs2’ ‘~/tmp/scratch/Rtmp683M9x’
‘~/tmp/scratch/Rtmp6E8jBb’ ‘~/tmp/scratch/Rtmp6Jaa3p’
‘~/tmp/scratch/Rtmp6uWcg3’ ‘~/tmp/scratch/Rtmp7UZUA8’
‘~/tmp/scratch/Rtmp8TOMph’ ‘~/tmp/scratch/Rtmp8iSDdp’
‘~/tmp/scratch/Rtmp9hGJSy’ ‘~/tmp/scratch/RtmpA68Xun’
‘~/tmp/scratch/RtmpAKwsg3’ ‘~/tmp/scratch/RtmpALW0mN’
‘~/tmp/scratch/RtmpARzZd1’ ‘~/tmp/scratch/RtmpAUFmnC’
‘~/tmp/scratch/RtmpBu9CR2’ ‘~/tmp/scratch/RtmpC0bFit’
‘~/tmp/scratch/RtmpCLZVPQ’ ‘~/tmp/scratch/RtmpE9BPBR’
‘~/tmp/scratch/RtmpErqK0e’ ‘~/tmp/scratch/RtmpF4pKA7’
‘~/tmp/scratch/RtmpFSBxOT’ ‘~/tmp/scratch/RtmpFSOyfO’
‘~/tmp/scratch/RtmpForJP9’ ‘~/tmp/scratch/RtmpGSZYxS’
‘~/tmp/scratch/RtmpHMlJ9t’ ‘~/tmp/scratch/RtmpHyRMcy’
‘~/tmp/scratch/RtmpIDhYQR’ ‘~/tmp/scratch/RtmpIE2EKN’
‘~/tmp/scratch/RtmpIPKvMm’ ‘~/tmp/scratch/RtmpIVD6sw’
‘~/tmp/scratch/RtmpIjwfjV’ ‘~/tmp/scratch/RtmpJ3pu7T’
‘~/tmp/scratch/RtmpJCSEmZ’ ‘~/tmp/scratch/RtmpJJ1QEE’
‘~/tmp/scratch/RtmpKYByK0’ ‘~/tmp/scratch/RtmpL9s1QX’
‘~/tmp/scratch/RtmpL9uZt2’ ‘~/tmp/scratch/RtmpLzt4yY’
‘~/tmp/scratch/RtmpM4nczn’ ‘~/tmp/scratch/RtmpMolVa5’
‘~/tmp/scratch/RtmpMzTnLw’ ‘~/tmp/scratch/RtmpNGSwfe’
‘~/tmp/scratch/RtmpNu0YiM’ ‘~/tmp/scratch/RtmpOwl3mz’
‘~/tmp/scratch/RtmpPFRMbJ’ ‘~/tmp/scratch/RtmpQaSewf’
‘~/tmp/scratch/RtmpQll4sU’ ‘~/tmp/scratch/RtmpRa1ql2’
‘~/tmp/scratch/RtmpSU7ZZt’ ‘~/tmp/scratch/RtmpSsfPKF’
‘~/tmp/scratch/RtmpUmX8FK’ ‘~/tmp/scratch/RtmpVI1SDq’
‘~/tmp/scratch/RtmpVl0zQn’ ‘~/tmp/scratch/RtmpWHpiZn’
‘~/tmp/scratch/RtmpXuWksc’ ‘~/tmp/scratch/RtmpY7znWC’
‘~/tmp/scratch/RtmpYQYzXb’ ‘~/tmp/scratch/RtmpYWGgco’
‘~/tmp/scratch/RtmpYvD4fR’ ‘~/tmp/scratch/RtmpYwaWj2’
‘~/tmp/scratch/RtmpaJJLqW’ ‘~/tmp/scratch/RtmpaltxcQ’
‘~/tmp/scratch/RtmpcIsTOI’ ‘~/tmp/scratch/RtmpccWcvP’
‘~/tmp/scratch/Rtmpd8ckkG’ ‘~/tmp/scratch/RtmpdbKeO3’
‘~/tmp/scratch/RtmpdwvrEy’ ‘~/tmp/scratch/RtmpeiBXkQ’
‘~/tmp/scratch/RtmpeyVCbL’ ‘~/tmp/scratch/RtmpfFQmmr’
‘~/tmp/scratch/Rtmpi235bB’ ‘~/tmp/scratch/RtmpidpJgc’
‘~/tmp/scratch/RtmpkB8aOR’ ‘~/tmp/scratch/RtmpknDoWG’
‘~/tmp/scratch/RtmplOjMoG’ ‘~/tmp/scratch/RtmplagbH1’
‘~/tmp/scratch/Rtmplhq8sV’ ‘~/tmp/scratch/RtmplkQd9l’
‘~/tmp/scratch/RtmpmqRiDn’ ‘~/tmp/scratch/RtmpoZLyP7’
‘~/tmp/scratch/RtmpolT01w’ ‘~/tmp/scratch/RtmposfXt7’
‘~/tmp/scratch/Rtmpp0dxbi’ ‘~/tmp/scratch/RtmppD7Dgx’
‘~/tmp/scratch/RtmppJWYur’ ‘~/tmp/scratch/RtmppoTbjj’
‘~/tmp/scratch/Rtmpq7k0cm’ ‘~/tmp/scratch/RtmpqcVfRw’
‘~/tmp/scratch/RtmpqiI071’ ‘~/tmp/scratch/RtmpsNm1NC’
‘~/tmp/scratch/RtmptMSb5D’ ‘~/tmp/scratch/RtmptbYLqW’
‘~/tmp/scratch/RtmpurRfze’ ‘~/tmp/scratch/RtmpuyLq6M’
‘~/tmp/scratch/RtmpvAkOQh’ ‘~/tmp/scratch/RtmpvpddVE’
‘~/tmp/scratch/RtmpvspshZ’ ‘~/tmp/scratch/RtmpwyCfqb’
‘~/tmp/scratch/RtmpyaHg0I’ ‘~/tmp/scratch/Rtmpz0RTyn’
‘~/tmp/scratch/RtmpzMV9PQ’ ‘~/tmp/scratch/RtmpzU2CsF’
‘~/tmp/scratch/RtmpzptrWf’ ‘~/tmp/scratch/Rtmpzro02R’
‘~/tmp/scratch/Rtmpzupste’ ‘~/tmp/scratch/xvfb-run.02SiXD’
‘~/tmp/scratch/xvfb-run.077Ann’ ‘~/tmp/scratch/xvfb-run.1gyDeq’
‘~/tmp/scratch/xvfb-run.7ioxXm’ ‘~/tmp/scratch/xvfb-run.9fKnq0’
‘~/tmp/scratch/xvfb-run.CZu9xc’ ‘~/tmp/scratch/xvfb-run.DtQZ6t’
‘~/tmp/scratch/xvfb-run.H5eA4L’ ‘~/tmp/scratch/xvfb-run.IfdNuV’
‘~/tmp/scratch/xvfb-run.LEa0dT’ ‘~/tmp/scratch/xvfb-run.Lx7p9z’
‘~/tmp/scratch/xvfb-run.SrrohN’ ‘~/tmp/scratch/xvfb-run.TEaigK’
‘~/tmp/scratch/xvfb-run.VxPjDo’ ‘~/tmp/scratch/xvfb-run.XB5ClR’
‘~/tmp/scratch/xvfb-run.XRmeaJ’ ‘~/tmp/scratch/xvfb-run.XnE0DN’
‘~/tmp/scratch/xvfb-run.YH5aDk’ ‘~/tmp/scratch/xvfb-run.YOoLO7’
‘~/tmp/scratch/xvfb-run.YoQJ8P’ ‘~/tmp/scratch/xvfb-run.YqKriZ’
‘~/tmp/scratch/xvfb-run.bCuUBj’ ‘~/tmp/scratch/xvfb-run.bK2MTq’
‘~/tmp/scratch/xvfb-run.cEXiwM’ ‘~/tmp/scratch/xvfb-run.ehhjpW’
‘~/tmp/scratch/xvfb-run.j2pAYr’ ‘~/tmp/scratch/xvfb-run.jOSrOD’
‘~/tmp/scratch/xvfb-run.jkoucd’ ‘~/tmp/scratch/xvfb-run.l329S1’
‘~/tmp/scratch/xvfb-run.nKfX2v’ ‘~/tmp/scratch/xvfb-run.q5cmWX’
‘~/tmp/scratch/xvfb-run.qf20tj’ ‘~/tmp/scratch/xvfb-run.s1if1J’
‘~/tmp/scratch/xvfb-run.uikOUE’ ‘~/tmp/scratch/xvfb-run.vtSwOE’
‘~/tmp/scratch/xvfb-run.wuJSeH’ ‘~/tmp/scratch/xvfb-run.yOKi2b’
‘~/tmp/scratch/xvfb-run.yaSwN6’ ‘~/tmp/scratch/xvfb-run.yq5hTo’
‘~/tmp/scratch/xvfb-run.zFvS7R’ ‘~/tmp/scratch/xvfb-run.zf8NNp’
Flavor: r-devel-linux-x86_64-debian-gcc