Time-Course Gene Set Analysis for RNA-Seq Data

Documentation for package ‘tcgsaseq’ version 1.0.0

tcgsaseq-package	TcGSAseq: a package to perform Time-course Gene Set Analysis of RNA-seq data
baduel	Small portion of RNA-seq data from plant physiology study.
baduel_gmt	Small portion of RNA-seq data from plant physiology study.
baduel_small	Small portion of RNA-seq data from plant physiology study.
design	Small portion of RNA-seq data from plant physiology study.
expr_norm_corr	Small portion of RNA-seq data from plant physiology study.
qAbundanceDist	Gene abundance proportion distribution of RNA-seq data.
sp_weights	Non parametric local heteroscedasticity weights
tcgsaseq	TcGSAseq: a package to perform Time-course Gene Set Analysis of RNA-seq data
tcgsa_seq	Time-course Gene Set Analyis
vc_test_asym	Computes variance component test statistic for longitudinal
vc_test_perm	Permutation-based variance component test statistic for longitudinal RNA-seq data
voom_weights	Precision weights accounting for heteroscedasticity in RNA-seq count data