Miscellaneous Functions for Survival Data

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Documentation for package ‘survMisc’ version 0.4.6

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survMisc-package Miscellaneous functions for survival analysis.
AIC Information criterion
AIC.coxph Information criterion
AICc Information criterion
AICc.coxph Information criterion
air Environmental data timeseries
as.Surv Convert 'time' and 'status' to a right-censored survival object, ordered by time
autoplot Generate a 'ggplot' for an 'rpart' object
autoplot.rpart Generate a 'ggplot' for an 'rpart' object
autoplot.survfit Generate a 'ggplot' for a 'survfit' object
autoplot.tableAndPlot Arrange and plot a survival plot, it's legend and a table.
BIC Information criterion
BIC.coxph Information criterion
btumors Brain tumors trial data
ci Confidence intervals for survival curves
ci.survfit Confidence intervals for survival curves
comp Compare survival curves
comp.coxph Compare survival curves
comp.survfit Compare survival curves
covMatSurv Covariance matrix for survival data
cutp Cutpoint for a continuous variable in a 'coxph' or 'survfit' model
cutp.coxph Cutpoint for a continuous variable in a 'coxph' or 'survfit' model
cutp.survfit Cutpoint for a continuous variable in a 'coxph' or 'survfit' model
dx Diagnostics for 'coxph' models
dx.coxph Diagnostics for 'coxph' models
gamTerms Individual terms of a Generalized Additive or Cox Proportional Hazards Model
gastric gastric cancer trial data
genSurv Generate survival data
genSurvDf Generate survival data
genSurvDt Generate survival data
gof Goodness of fit test for 'coxph' models
gof.coxph Goodness of fit test for 'coxph' models
ic Information criterion
local Local tests for a model
locLR Local tests for a model
locLR.coxph Local tests for a model
locScore Local tests for a model
locScore.coxph Local tests for a model
locWald Local tests for a model
locWald.coxph Local tests for a model
lrSS Sample size required to show difference in survival by log-rank test given prior information about Kaplan-Meier estimate
mean.Surv Mean for 'Surv' object
median Quantiles and median for 'Surv', 'survfit' and 'coxph' objects
median.coxph Quantiles and median for 'Surv', 'survfit' and 'coxph' objects
median.Surv Quantiles and median for 'Surv', 'survfit' and 'coxph' objects
median.survfit Quantiles and median for 'Surv', 'survfit' and 'coxph' objects
mpip Multi-center Post-Infarction Project
multi Multiple 'coxph' models
multi.coxph Multiple 'coxph' models
plot.multi.coxph Plot an 'multi.coxph' object
plot.MultiCoxph Plot an 'multi.coxph' object
plot.Surv Plot Survival object
plotTerm Plot individual terms of a Generalized Additive 'gam' or Cox Proportional Hazards 'coxph' Model
profLik Profile likelihood for coefficients in Coxph model
quantile Quantiles and median for 'Surv', 'survfit' and 'coxph' objects
quantile.coxph Quantiles and median for 'Surv', 'survfit' and 'coxph' objects
quantile.Surv Quantiles and median for 'Surv', 'survfit' and 'coxph' objects
quantile.survfit Quantiles and median for 'Surv', 'survfit' and 'coxph' objects
rsq r^2 measures for a a 'coxph' or 'survfit' model
rsq.coxph r^2 measures for a a 'coxph' or 'survfit' model
rsq.survfit r^2 measures for a a 'coxph' or 'survfit' model
sf Estimates of *s*urvival (or hazard) *f*unction based on n and e
sig Significiance tests of coefficients in a 'coxph' model
sig.coxph Significiance tests of coefficients in a 'coxph' model
survMisc Miscellaneous functions for survival analysis.
tableRhs Table the outcome against all predictors in a formula
tne Time, No. at risk, No. events
tne.coxph Time, No. at risk, No. events
tne.formula Time, No. at risk, No. events
tne.Surv Time, No. at risk, No. events
tne.survfit Time, No. at risk, No. events
tneBMT Time, no. at risk, no. events for BMT data
tneKidney Time, no. at risk, no. events for kidney data.
whas100 Worcester Heart Attack Study WHAS100 Data
whas500 Worcester Heart Attack Study WHAS500 Data