Process Control And Internal Validation Of Forensic STR Kits

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Documentation for package ‘strvalidator’ version 1.4.0

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strValidator-package Simplifies internal validation of forensic STR typing kits
addColor Add color information.
addData Adds new data columns to a data frame
addData_gui Add data
addDye_gui Add dye information
addMarker Add missing markers.
addMarker_gui Add missing markers
addSize Add size information.
addSize_gui Add size
calculateBalance Calculate balance
calculateBalance_gui Calculate Balance
calculateCapillary Calculate capillary balance
calculateCapillary_gui Capillary balance
calculateConcordance Calculate concordance.
calculateConcordance_gui Calculate Concordance
calculateDropout Calculate drop-out events
calculateDropout_gui Calculate Dropout
calculateHeight Calculate peak height.
calculateHeight_gui Calculate peak height
calculateHeterozygous Calculate heterozygous loci
calculateHeterozygous_gui Calculate Heterozygous
calculateMixture Calculate mixture.
calculateMixture_gui Calculate Mixture
calculateOL Off-ladder risk
calculateOL_gui Analyse off-ladder alleles
calculateOverlap Bins Overlap
calculateOverlap_gui Bins Overlap
calculatePeaks Count peaks
calculatePeaks_gui Calculate peaks
calculatePullup Calculate Pull-up
calculatePullup_gui Calculate Spectral Pull-Up
calculateResultType Calculate result type
calculateResultType_gui Calculate Result Type
calculateStutter Calculate stutter
calculateStutter_gui Calculate Stutters
checkDataset Plot Stutter GUI
checkSubset check subset
checkSubset_gui Check subsetting of a dataset
colNames colNames
combineBinsAndPanels combine bins and panels files.
combine_gui Combine two datasets
cropData_gui Crop or replace
detectKit Detect kit
editData_gui Edit or view data frames
export_gui Export objects
filterProfile Filter out profiles from DNA results
filterProfile_gui Filter Profile
generateEPG Generate EPG
generateEPG_gui Generate EPG
getKit Get kit
ggsave_gui Save image
guessProfile Guess Profile
guessProfile_gui Guess profile
import Import GeneMapper.
import_gui Import from text file
listObjects List objects
makeKit_gui Make kit
modelDropout_gui model and plot drop-out events
plotBalance_gui Plot Balance
plotCapillary_gui Plot Capillary Balance
plotDistribution_gui Plot Distribution
plotDropout_gui Plot Dropout
plotKit_gui Plot kit marker ranges
plotPeaks_gui Plot Peaks
plotPrecision_gui Plot Precision
plotPullup_gui Plot Pull-up
plotResultType_gui Plot Result Type
plotStutter_gui Plot Stutter
ref1 ESX17 Positive Control Profile
ref11 ESX17 Positive Control Profile
ref2 SGMPlus example data
ref3 ESX17 example data for dropout analysis.
ref4 ESX17 example data for dropout analysis.
ref51 ESX17 example data for mixture analysis.
ref52 ESX17 example data for mixture analysis.
set1 Typing data in 'GeneMapper' format
set2 SGMPlus example data
set3 ESX17 example data for dropout analysis.
set4 ESX17 example data for dropout analysis.
set5 ESX17 example data for mixture analysis.
slim Slim data frames
slim_gui Slim data frames
sortMarker Sort markers
strValidator Simplifies internal validation of forensic STR typing kits
strvalidator Graphical user interface for the STR-validator package
tableBalance Table stutter
tableBalance_gui Table balance
tableCapillary Table capillary
tableCapillary_gui Table Capillary
tablePrecision Calculate precision
tablePrecision_gui Calculate Precision
tableStutter Table stutter
tableStutter_gui Table Stutter
trim Trim data
trim_gui Trim data