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| evobiR-package | evobiR: Evolutionary Biology in R |
| 1.fasta | simulated SNP data |
| 2.fasta | simulated SNP data |
| 3.fasta | simulated SNP data |
| AnalyzeAssembly | Analyze Genome Assembly |
| assembly.fasta | a sample of a genome |
| CalcD | Calculate Patterson's D-statistic |
| CalcPartD | Calculate Patterson's D-statistic |
| CalcPopD | Calculate Patterson's D-statistic |
| CoalSim | Coalescence Simulations |
| data.taxonomy | taxonomic table |
| DriftSim | Simulate Allele Frequencies |
| evobiR | evobiR: Evolutionary Biology in R |
| FuzzyMatch | Find Close Matches in a tree and dataset |
| genome | A small portion of the genome of Tribolium confusum |
| GenomeSym | Genome Simulation |
| GetTaxonomy | Create a taxonomy table |
| HetLevels | Calculates heterozygosity based on ambigous IUPAC nucleotide codes |
| HighLevelTree | Prune a phylogeny to a higher taxonomic levels. |
| horn.beetle.csv | Gnatocerus measurements |
| hym.tree | Phylogenetic tree |
| MaxTips | Maximize Retained Tips |
| mcmc2 | mcmc log file |
| mcmc3 | mcmc log file |
| mite.data | cytogenetic mite data |
| mite.tree | phylogenetic tree of mites |
| PPSDiscrete | Create Simulated Datasets via PPS |
| ReplTable | Maximize Retained Tips |
| ResSel | Selection on Residuals |
| SampleTrees | Select a random sample of trees |
| SelSim | Simulate Allele Frequencies |
| species.tree | Species Phylogenetic tree |
| taxa.table | A table with taxonomic information |
| tree.taxonomy | taxonomic table |
| trees | 10 Phylogenetic trees |
| trees.nex | 100 Phylogenetic trees |